Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.9■■□□□ 1.1
CDK7P50613 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.9■■□□□ 1.1
CDK7P50613 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDK7P50613 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDK7P50613 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDK7P50613 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK7P50613 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.89■■□□□ 1.09
CDK7P50613 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CDK7P50613 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDK7P50613 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.89■■□□□ 1.09
CDK7P50613 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDK7P50613 AC091390.4-202ENST00000476426 537 ntBASIC21.89■■□□□ 1.09
CDK7P50613 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK7P50613 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.89■■□□□ 1.09
CDK7P50613 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.89■■□□□ 1.09
CDK7P50613 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.89■■□□□ 1.09
CDK7P50613 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK7P50613 AL049796.1-201ENST00000565336 1766 ntBASIC21.89■■□□□ 1.09
CDK7P50613 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CDK7P50613 AC007375.3-201ENST00000600936 2314 ntBASIC21.89■■□□□ 1.09
CDK7P50613 Z98882.1-201ENST00000622160 2253 ntBASIC21.89■■□□□ 1.09
CDK7P50613 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDK7P50613 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.88■■□□□ 1.09
CDK7P50613 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.88■■□□□ 1.09
CDK7P50613 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CDK7P50613 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 KRT18P16-201ENST00000510337 1294 ntBASIC21.88■■□□□ 1.09
CDK7P50613 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 AL358472.4-201ENST00000633140 710 ntBASIC21.88■■□□□ 1.09
CDK7P50613 MYC-208ENST00000641036 567 ntBASIC21.88■■□□□ 1.09
CDK7P50613 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CDK7P50613 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.88■■□□□ 1.09
CDK7P50613 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDK7P50613 TFP1-202ENST00000475455 1573 ntBASIC21.87■■□□□ 1.09
CDK7P50613 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CDK7P50613 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 AC117947.1-201ENST00000427448 529 ntBASIC21.87■■□□□ 1.09
CDK7P50613 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK7P50613 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK7P50613 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK7P50613 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK7P50613 AC091076.1-201ENST00000610741 619 ntBASIC21.87■■□□□ 1.09
CDK7P50613 AC131212.4-201ENST00000623606 975 ntBASIC21.87■■□□□ 1.09
CDK7P50613 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.87■■□□□ 1.09
CDK7P50613 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.87■■□□□ 1.09
CDK7P50613 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDK7P50613 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CDK7P50613 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CDK7P50613 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.86■■□□□ 1.09
CDK7P50613 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CDK7P50613 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CDK7P50613 FAM8A6P-201ENST00000407496 1135 ntBASIC21.86■■□□□ 1.09
CDK7P50613 UPK3BP1-201ENST00000428678 509 ntBASIC21.86■■□□□ 1.09
CDK7P50613 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.86■■□□□ 1.09
CDK7P50613 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.86■■□□□ 1.09
CDK7P50613 AP000692.2-201ENST00000608391 879 ntBASIC21.86■■□□□ 1.09
CDK7P50613 AL138966.2-201ENST00000621997 464 ntBASIC21.86■■□□□ 1.09
CDK7P50613 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK7P50613 AL121603.2-201ENST00000557373 2117 ntBASIC21.86■■□□□ 1.09
CDK7P50613 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK7P50613 AC116351.2-201ENST00000606540 1585 ntBASIC21.86■■□□□ 1.09
CDK7P50613 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDK7P50613 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CDK7P50613 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.85■■□□□ 1.09
CDK7P50613 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK7P50613 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDK7P50613 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
CDK7P50613 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CDK7P50613 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CDK7P50613 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.85■■□□□ 1.09
CDK7P50613 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.85■■□□□ 1.09
CDK7P50613 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK7P50613 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.85■■□□□ 1.09
CDK7P50613 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDK7P50613 LINC01238-205ENST00000567549 1107 ntBASIC21.85■■□□□ 1.09
CDK7P50613 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDK7P50613 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.85■■□□□ 1.09
CDK7P50613 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms