Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LHX2P50458 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LHX2P50458 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.68■□□□□ 0.42
LHX2P50458 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LHX2P50458 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LHX2P50458 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.68■□□□□ 0.42
LHX2P50458 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.68■□□□□ 0.42
LHX2P50458 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.68■□□□□ 0.42
LHX2P50458 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LHX2P50458 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.68■□□□□ 0.42
LHX2P50458 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LHX2P50458 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.68■□□□□ 0.42
LHX2P50458 AC099778.1-201ENST00000568593 1911 ntBASIC17.68■□□□□ 0.42
LHX2P50458 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LHX2P50458 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.68■□□□□ 0.42
LHX2P50458 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LHX2P50458 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LHX2P50458 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.67■□□□□ 0.42
LHX2P50458 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LHX2P50458 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.67■□□□□ 0.42
LHX2P50458 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.67■□□□□ 0.42
LHX2P50458 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.67■□□□□ 0.42
LHX2P50458 KRT18P16-201ENST00000510337 1294 ntBASIC17.67■□□□□ 0.42
LHX2P50458 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.67■□□□□ 0.42
LHX2P50458 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.67■□□□□ 0.42
LHX2P50458 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.67■□□□□ 0.42
LHX2P50458 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LHX2P50458 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LHX2P50458 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX2P50458 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX2P50458 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX2P50458 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.66■□□□□ 0.42
LHX2P50458 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
LHX2P50458 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX2P50458 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LHX2P50458 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX2P50458 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX2P50458 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.66■□□□□ 0.42
LHX2P50458 TSPY7P-201ENST00000431358 1114 ntBASIC17.66■□□□□ 0.42
LHX2P50458 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX2P50458 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.66■□□□□ 0.42
LHX2P50458 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX2P50458 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.66■□□□□ 0.42
LHX2P50458 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX2P50458 AL353708.3-201ENST00000610272 989 ntBASIC17.66■□□□□ 0.42
LHX2P50458 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LHX2P50458 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX2P50458 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX2P50458 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX2P50458 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.66■□□□□ 0.42
LHX2P50458 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX2P50458 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX2P50458 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.65■□□□□ 0.42
LHX2P50458 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.65■□□□□ 0.42
LHX2P50458 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.65■□□□□ 0.42
LHX2P50458 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.65■□□□□ 0.42
LHX2P50458 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.65■□□□□ 0.42
LHX2P50458 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.65■□□□□ 0.42
LHX2P50458 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.65■□□□□ 0.42
LHX2P50458 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
LHX2P50458 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.65■□□□□ 0.42
LHX2P50458 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.65■□□□□ 0.42
LHX2P50458 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LHX2P50458 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
LHX2P50458 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.65■□□□□ 0.42
LHX2P50458 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX2P50458 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LHX2P50458 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.65■□□□□ 0.42
LHX2P50458 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LHX2P50458 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.65■□□□□ 0.42
LHX2P50458 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LHX2P50458 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.64■□□□□ 0.42
LHX2P50458 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms