Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.68■□□□□ 0.58
CLK3P49761 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.68■□□□□ 0.58
CLK3P49761 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLK3P49761 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK3P49761 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLK3P49761 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.68■□□□□ 0.58
CLK3P49761 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
CLK3P49761 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLK3P49761 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.67■□□□□ 0.58
CLK3P49761 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLK3P49761 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.67■□□□□ 0.58
CLK3P49761 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CLK3P49761 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CLK3P49761 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.67■□□□□ 0.58
CLK3P49761 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.67■□□□□ 0.58
CLK3P49761 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.67■□□□□ 0.58
CLK3P49761 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLK3P49761 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.67■□□□□ 0.58
CLK3P49761 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.67■□□□□ 0.58
CLK3P49761 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.67■□□□□ 0.58
CLK3P49761 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLK3P49761 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 KRT8P36-201ENST00000489121 1440 ntBASIC18.66■□□□□ 0.58
CLK3P49761 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CLK3P49761 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.66■□□□□ 0.58
CLK3P49761 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.66■□□□□ 0.58
CLK3P49761 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CLK3P49761 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.66■□□□□ 0.58
CLK3P49761 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLK3P49761 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.66■□□□□ 0.58
CLK3P49761 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.66■□□□□ 0.58
CLK3P49761 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.66■□□□□ 0.58
CLK3P49761 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.66■□□□□ 0.58
CLK3P49761 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 AC004408.2-201ENST00000623613 2777 ntBASIC18.66■□□□□ 0.58
CLK3P49761 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLK3P49761 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.66■□□□□ 0.58
CLK3P49761 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLK3P49761 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLK3P49761 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 BX276092.2-201ENST00000417668 665 ntBASIC18.65■□□□□ 0.58
CLK3P49761 AL355472.2-201ENST00000422958 438 ntBASIC18.65■□□□□ 0.58
CLK3P49761 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.65■□□□□ 0.58
CLK3P49761 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLK3P49761 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.65■□□□□ 0.58
CLK3P49761 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.65■□□□□ 0.58
CLK3P49761 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.65■□□□□ 0.58
CLK3P49761 AL109923.1-201ENST00000618799 583 ntBASIC18.65■□□□□ 0.58
CLK3P49761 AC105020.6-201ENST00000621523 1217 ntBASIC18.65■□□□□ 0.58
CLK3P49761 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.65■□□□□ 0.58
CLK3P49761 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.65■□□□□ 0.58
CLK3P49761 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK3P49761 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLK3P49761 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
CLK3P49761 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLK3P49761 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLK3P49761 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLK3P49761 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLK3P49761 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.64■□□□□ 0.57
CLK3P49761 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK3P49761 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
CLK3P49761 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.64■□□□□ 0.57
CLK3P49761 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK3P49761 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms