Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RXRGP48443 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RXRGP48443 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.76■□□□□ 0.75
RXRGP48443 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RXRGP48443 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RXRGP48443 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRGP48443 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RXRGP48443 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRGP48443 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.76■□□□□ 0.75
RXRGP48443 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.76■□□□□ 0.75
RXRGP48443 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRGP48443 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RXRGP48443 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.76■□□□□ 0.75
RXRGP48443 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RXRGP48443 MIR2861-201ENST00000636310 90 ntBASIC19.76■□□□□ 0.75
RXRGP48443 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RXRGP48443 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RXRGP48443 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.76■□□□□ 0.75
RXRGP48443 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RXRGP48443 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RXRGP48443 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RXRGP48443 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.75■□□□□ 0.75
RXRGP48443 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 MIR1224-201ENST00000408193 85 ntBASIC19.75■□□□□ 0.75
RXRGP48443 KRT16P5-201ENST00000455284 522 ntBASIC19.75■□□□□ 0.75
RXRGP48443 TSPY15P-201ENST00000457163 923 ntBASIC19.75■□□□□ 0.75
RXRGP48443 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RXRGP48443 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RXRGP48443 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.75■□□□□ 0.75
RXRGP48443 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RXRGP48443 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RXRGP48443 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RXRGP48443 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.74■□□□□ 0.75
RXRGP48443 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RXRGP48443 AC087499.1-201ENST00000418141 1075 ntBASIC19.74■□□□□ 0.75
RXRGP48443 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.74■□□□□ 0.75
RXRGP48443 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.74■□□□□ 0.75
RXRGP48443 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.74■□□□□ 0.75
RXRGP48443 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.74■□□□□ 0.75
RXRGP48443 AC097493.4-201ENST00000641197 219 ntBASIC19.74■□□□□ 0.75
RXRGP48443 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.74■□□□□ 0.75
RXRGP48443 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.74■□□□□ 0.75
RXRGP48443 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RXRGP48443 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RXRGP48443 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
RXRGP48443 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RXRGP48443 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.73■□□□□ 0.75
RXRGP48443 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.73■□□□□ 0.75
RXRGP48443 AL355075.4-201ENST00000554988 638 ntBASIC19.73■□□□□ 0.75
RXRGP48443 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.73■□□□□ 0.75
RXRGP48443 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 AC012306.2-201ENST00000609350 630 ntBASIC19.73■□□□□ 0.75
RXRGP48443 AC133561.5-201ENST00000635547 218 ntBASIC19.73■□□□□ 0.75
RXRGP48443 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.73■□□□□ 0.75
RXRGP48443 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.73■□□□□ 0.75
RXRGP48443 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RXRGP48443 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RXRGP48443 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RXRGP48443 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.73■□□□□ 0.75
RXRGP48443 AL049796.1-201ENST00000565336 1766 ntBASIC19.72■□□□□ 0.75
RXRGP48443 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.72■□□□□ 0.75
RXRGP48443 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RXRGP48443 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms