Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP13P45452 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP13P45452 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP13P45452 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
MMP13P45452 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP13P45452 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP13P45452 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP13P45452 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP13P45452 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP13P45452 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MMP13P45452 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP13P45452 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MMP13P45452 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP13P45452 AC091874.3-201ENST00000512672 1195 ntBASIC20.53■□□□□ 0.88
MMP13P45452 AC098934.4-201ENST00000564127 592 ntBASIC20.53■□□□□ 0.88
MMP13P45452 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MMP13P45452 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP13P45452 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
MMP13P45452 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.53■□□□□ 0.88
MMP13P45452 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP13P45452 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
MMP13P45452 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
MMP13P45452 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.53■□□□□ 0.88
MMP13P45452 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MMP13P45452 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP13P45452 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MMP13P45452 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.52■□□□□ 0.88
MMP13P45452 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP13P45452 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.52■□□□□ 0.88
MMP13P45452 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP13P45452 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP13P45452 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP13P45452 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP13P45452 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.52■□□□□ 0.88
MMP13P45452 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP13P45452 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP13P45452 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MMP13P45452 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.52■□□□□ 0.88
MMP13P45452 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.52■□□□□ 0.88
MMP13P45452 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
MMP13P45452 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP13P45452 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.52■□□□□ 0.88
MMP13P45452 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.52■□□□□ 0.88
MMP13P45452 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MMP13P45452 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MMP13P45452 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.52■□□□□ 0.87
MMP13P45452 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.52■□□□□ 0.87
MMP13P45452 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MMP13P45452 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MMP13P45452 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MMP13P45452 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MMP13P45452 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MMP13P45452 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MMP13P45452 AC073210.2-201ENST00000430369 194 ntBASIC20.51■□□□□ 0.87
MMP13P45452 AC069152.1-201ENST00000438030 544 ntBASIC20.51■□□□□ 0.87
MMP13P45452 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.51■□□□□ 0.87
MMP13P45452 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.51■□□□□ 0.87
MMP13P45452 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MMP13P45452 AC133041.1-202ENST00000642053 222 ntBASIC20.51■□□□□ 0.87
MMP13P45452 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MMP13P45452 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.51■□□□□ 0.87
MMP13P45452 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.51■□□□□ 0.87
MMP13P45452 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MMP13P45452 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
MMP13P45452 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.5■□□□□ 0.87
MMP13P45452 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.5■□□□□ 0.87
MMP13P45452 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
MMP13P45452 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.5■□□□□ 0.87
MMP13P45452 AC097658.1-201ENST00000475555 843 ntBASIC20.5■□□□□ 0.87
MMP13P45452 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.5■□□□□ 0.87
MMP13P45452 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.5■□□□□ 0.87
MMP13P45452 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.5■□□□□ 0.87
MMP13P45452 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MMP13P45452 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.5■□□□□ 0.87
MMP13P45452 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MMP13P45452 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.49■□□□□ 0.87
MMP13P45452 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MMP13P45452 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms