Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.46■■□□□ 1.51
PDE6BP35913 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.46■■□□□ 1.51
PDE6BP35913 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDE6BP35913 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PDE6BP35913 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.46■■□□□ 1.51
PDE6BP35913 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PDE6BP35913 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
PDE6BP35913 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
PDE6BP35913 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.45■■□□□ 1.51
PDE6BP35913 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
PDE6BP35913 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.45■■□□□ 1.5
PDE6BP35913 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC24.45■■□□□ 1.5
PDE6BP35913 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.45■■□□□ 1.5
PDE6BP35913 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 COPS8-203ENST00000409334 794 ntTSL 5 BASIC24.45■■□□□ 1.5
PDE6BP35913 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
PDE6BP35913 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.45■■□□□ 1.5
PDE6BP35913 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.45■■□□□ 1.5
PDE6BP35913 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC24.45■■□□□ 1.5
PDE6BP35913 AC141257.4-201ENST00000634557 245 ntBASIC24.45■■□□□ 1.5
PDE6BP35913 AC136944.6-201ENST00000634818 245 ntBASIC24.45■■□□□ 1.5
PDE6BP35913 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 DPP3P2-201ENST00000416030 1696 ntBASIC24.45■■□□□ 1.5
PDE6BP35913 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PDE6BP35913 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.44■■□□□ 1.5
PDE6BP35913 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PDE6BP35913 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PDE6BP35913 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC24.44■■□□□ 1.5
PDE6BP35913 CD70-202ENST00000423145 881 ntTSL 2 BASIC24.44■■□□□ 1.5
PDE6BP35913 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.44■■□□□ 1.5
PDE6BP35913 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.44■■□□□ 1.5
PDE6BP35913 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.44■■□□□ 1.5
PDE6BP35913 AL121956.5-201ENST00000625261 221 ntBASIC24.44■■□□□ 1.5
PDE6BP35913 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.44■■□□□ 1.5
PDE6BP35913 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDE6BP35913 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDE6BP35913 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PDE6BP35913 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PDE6BP35913 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC24.44■■□□□ 1.5
PDE6BP35913 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
PDE6BP35913 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PDE6BP35913 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC24.43■■□□□ 1.5
PDE6BP35913 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.43■■□□□ 1.5
PDE6BP35913 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC24.43■■□□□ 1.5
PDE6BP35913 AL121894.2-201ENST00000602977 491 ntBASIC24.43■■□□□ 1.5
PDE6BP35913 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.43■■□□□ 1.5
PDE6BP35913 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.43■■□□□ 1.5
PDE6BP35913 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 AC092338.2-201ENST00000568827 1415 ntBASIC24.43■■□□□ 1.5
PDE6BP35913 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDE6BP35913 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.43■■□□□ 1.5
PDE6BP35913 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDE6BP35913 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.42■■□□□ 1.5
PDE6BP35913 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDE6BP35913 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.42■■□□□ 1.5
PDE6BP35913 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
PDE6BP35913 PCED1CP-201ENST00000419887 785 ntBASIC24.42■■□□□ 1.5
PDE6BP35913 KRT18P48-201ENST00000434763 852 ntBASIC24.42■■□□□ 1.5
PDE6BP35913 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDE6BP35913 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
PDE6BP35913 FAM86EP-206ENST00000510506 987 ntBASIC24.42■■□□□ 1.5
PDE6BP35913 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.42■■□□□ 1.5
PDE6BP35913 CD320-202ENST00000537716 1119 ntTSL 2 BASIC24.42■■□□□ 1.5
PDE6BP35913 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC24.42■■□□□ 1.5
PDE6BP35913 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDE6BP35913 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC24.42■■□□□ 1.5
PDE6BP35913 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.42■■□□□ 1.5
PDE6BP35913 AC011558.1-201ENST00000623459 338 ntBASIC24.42■■□□□ 1.5
PDE6BP35913 AL031432.5-201ENST00000641059 760 ntBASIC24.42■■□□□ 1.5
PDE6BP35913 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDE6BP35913 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.42■■□□□ 1.5
PDE6BP35913 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PDE6BP35913 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.42■■□□□ 1.5
PDE6BP35913 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.41■■□□□ 1.5
PDE6BP35913 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PDE6BP35913 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.41■■□□□ 1.5
PDE6BP35913 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PDE6BP35913 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC24.41■■□□□ 1.5
PDE6BP35913 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDE6BP35913 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.41■■□□□ 1.5
PDE6BP35913 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDE6BP35913 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDE6BP35913 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms