Protein–RNA interactions for Protein: P30939

HTR1F, 5-hydroxytryptamine receptor 1F, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1FP30939 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HTR1FP30939 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.67■□□□□ 0.42
HTR1FP30939 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.67■□□□□ 0.42
HTR1FP30939 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HTR1FP30939 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HTR1FP30939 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.67■□□□□ 0.42
HTR1FP30939 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HTR1FP30939 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HTR1FP30939 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HTR1FP30939 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HTR1FP30939 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HTR1FP30939 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.66■□□□□ 0.42
HTR1FP30939 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1FP30939 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.66■□□□□ 0.42
HTR1FP30939 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1FP30939 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 KRT18P61-201ENST00000585825 1298 ntBASIC17.66■□□□□ 0.42
HTR1FP30939 AC016405.3-201ENST00000607710 860 ntBASIC17.66■□□□□ 0.42
HTR1FP30939 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
HTR1FP30939 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HTR1FP30939 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.66■□□□□ 0.42
HTR1FP30939 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1FP30939 AC120498.9-201ENST00000339021 3867 ntBASIC17.66■□□□□ 0.42
HTR1FP30939 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HTR1FP30939 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.66■□□□□ 0.42
HTR1FP30939 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.65■□□□□ 0.42
HTR1FP30939 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HTR1FP30939 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HTR1FP30939 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
HTR1FP30939 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.65■□□□□ 0.42
HTR1FP30939 HLA-G-202ENST00000376815 851 ntBASIC17.65■□□□□ 0.42
HTR1FP30939 HLA-G-203ENST00000376818 1127 ntBASIC17.65■□□□□ 0.42
HTR1FP30939 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.65■□□□□ 0.42
HTR1FP30939 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.65■□□□□ 0.42
HTR1FP30939 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 AC007322.4-201ENST00000509611 723 ntBASIC17.65■□□□□ 0.42
HTR1FP30939 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 AC100791.3-201ENST00000617619 330 ntBASIC17.65■□□□□ 0.42
HTR1FP30939 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
HTR1FP30939 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HTR1FP30939 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 AL138781.2-201ENST00000617896 1843 ntBASIC17.65■□□□□ 0.42
HTR1FP30939 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HTR1FP30939 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HTR1FP30939 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HTR1FP30939 PHGDH-210ENST00000641115 1638 ntBASIC17.65■□□□□ 0.42
HTR1FP30939 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
HTR1FP30939 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
HTR1FP30939 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTR1FP30939 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.64■□□□□ 0.41
HTR1FP30939 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTR1FP30939 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTR1FP30939 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTR1FP30939 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTR1FP30939 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
HTR1FP30939 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTR1FP30939 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HTR1FP30939 MCRIP2P1-201ENST00000394346 511 ntBASIC17.64■□□□□ 0.41
HTR1FP30939 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms