Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.93■□□□□ 0.46
GDF1P27539 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GDF1P27539 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.92■□□□□ 0.46
GDF1P27539 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.92■□□□□ 0.46
GDF1P27539 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
GDF1P27539 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.92■□□□□ 0.46
GDF1P27539 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
GDF1P27539 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GDF1P27539 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.92■□□□□ 0.46
GDF1P27539 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
GDF1P27539 AL512408.1-201ENST00000569378 2000 ntBASIC17.92■□□□□ 0.46
GDF1P27539 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 HTR7P1-201ENST00000538670 1336 ntBASIC17.92■□□□□ 0.46
GDF1P27539 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GDF1P27539 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.91■□□□□ 0.46
GDF1P27539 GABARAPL3-202ENST00000624044 1851 ntBASIC17.91■□□□□ 0.46
GDF1P27539 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.91■□□□□ 0.46
GDF1P27539 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.91■□□□□ 0.46
GDF1P27539 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.91■□□□□ 0.46
GDF1P27539 MIR4497-201ENST00000583208 89 ntBASIC17.91■□□□□ 0.46
GDF1P27539 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.91■□□□□ 0.46
GDF1P27539 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GDF1P27539 AL049637.2-201ENST00000641778 930 ntBASIC17.91■□□□□ 0.46
GDF1P27539 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.91■□□□□ 0.46
GDF1P27539 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
GDF1P27539 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 TFP1-202ENST00000475455 1573 ntBASIC17.91■□□□□ 0.46
GDF1P27539 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GDF1P27539 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.9■□□□□ 0.46
GDF1P27539 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.9■□□□□ 0.46
GDF1P27539 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.9■□□□□ 0.46
GDF1P27539 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.9■□□□□ 0.46
GDF1P27539 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GDF1P27539 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GDF1P27539 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GDF1P27539 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
GDF1P27539 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GDF1P27539 AL353807.1-201ENST00000427475 662 ntBASIC17.9■□□□□ 0.46
GDF1P27539 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GDF1P27539 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.9■□□□□ 0.46
GDF1P27539 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.9■□□□□ 0.46
GDF1P27539 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.9■□□□□ 0.46
GDF1P27539 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.9■□□□□ 0.46
GDF1P27539 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
GDF1P27539 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.9■□□□□ 0.46
GDF1P27539 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
GDF1P27539 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GDF1P27539 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.9■□□□□ 0.46
GDF1P27539 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GDF1P27539 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GDF1P27539 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
GDF1P27539 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
GDF1P27539 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GDF1P27539 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GDF1P27539 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GDF1P27539 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GDF1P27539 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GDF1P27539 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
GDF1P27539 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
GDF1P27539 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.89■□□□□ 0.45
GDF1P27539 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GDF1P27539 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GDF1P27539 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GDF1P27539 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.89■□□□□ 0.45
GDF1P27539 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.89■□□□□ 0.45
GDF1P27539 AC092667.1-201ENST00000434301 2586 ntBASIC17.89■□□□□ 0.45
GDF1P27539 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.89■□□□□ 0.45
GDF1P27539 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GDF1P27539 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
GDF1P27539 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms