Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.38■□□□□ 0.69
VARSP26640 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.38■□□□□ 0.69
VARSP26640 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.38■□□□□ 0.69
VARSP26640 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VARSP26640 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
VARSP26640 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VARSP26640 PTBP1P-201ENST00000554374 1601 ntBASIC19.38■□□□□ 0.69
VARSP26640 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.38■□□□□ 0.69
VARSP26640 C2orf69P4-201ENST00000565394 541 ntBASIC19.38■□□□□ 0.69
VARSP26640 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VARSP26640 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
VARSP26640 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.37■□□□□ 0.69
VARSP26640 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VARSP26640 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VARSP26640 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.37■□□□□ 0.69
VARSP26640 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VARSP26640 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARSP26640 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARSP26640 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARSP26640 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.37■□□□□ 0.69
VARSP26640 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
VARSP26640 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.37■□□□□ 0.69
VARSP26640 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VARSP26640 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VARSP26640 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VARSP26640 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.36■□□□□ 0.69
VARSP26640 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.36■□□□□ 0.69
VARSP26640 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.36■□□□□ 0.69
VARSP26640 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
VARSP26640 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.36■□□□□ 0.69
VARSP26640 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.36■□□□□ 0.69
VARSP26640 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.36■□□□□ 0.69
VARSP26640 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VARSP26640 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VARSP26640 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.36■□□□□ 0.69
VARSP26640 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
VARSP26640 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VARSP26640 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VARSP26640 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.36■□□□□ 0.69
VARSP26640 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.35■□□□□ 0.69
VARSP26640 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
VARSP26640 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARSP26640 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARSP26640 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.35■□□□□ 0.69
VARSP26640 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.35■□□□□ 0.69
VARSP26640 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARSP26640 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARSP26640 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARSP26640 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VARSP26640 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VARSP26640 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.35■□□□□ 0.69
VARSP26640 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VARSP26640 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.35■□□□□ 0.69
VARSP26640 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.35■□□□□ 0.69
VARSP26640 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.35■□□□□ 0.69
VARSP26640 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VARSP26640 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VARSP26640 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VARSP26640 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.35■□□□□ 0.69
VARSP26640 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VARSP26640 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VARSP26640 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.34■□□□□ 0.69
VARSP26640 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
VARSP26640 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.34■□□□□ 0.69
VARSP26640 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
VARSP26640 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.34■□□□□ 0.69
VARSP26640 AC097658.1-201ENST00000475555 843 ntBASIC19.34■□□□□ 0.69
VARSP26640 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
VARSP26640 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VARSP26640 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms