Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.6■□□□□ 0.25
LMO1P25800 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO1P25800 LETM1P2-201ENST00000597330 2178 ntBASIC16.6■□□□□ 0.25
LMO1P25800 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LMO1P25800 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO1P25800 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.6■□□□□ 0.25
LMO1P25800 GUSBP6-202ENST00000438529 1198 ntBASIC16.6■□□□□ 0.25
LMO1P25800 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LMO1P25800 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.6■□□□□ 0.25
LMO1P25800 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.6■□□□□ 0.25
LMO1P25800 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO1P25800 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO1P25800 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO1P25800 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.6■□□□□ 0.25
LMO1P25800 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LMO1P25800 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.6■□□□□ 0.25
LMO1P25800 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.6■□□□□ 0.25
LMO1P25800 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LMO1P25800 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.59■□□□□ 0.25
LMO1P25800 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LMO1P25800 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
LMO1P25800 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LMO1P25800 ID1-201ENST00000376105 1233 ntBASIC16.59■□□□□ 0.25
LMO1P25800 SLC29A4P1-201ENST00000398760 971 ntBASIC16.59■□□□□ 0.25
LMO1P25800 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.59■□□□□ 0.25
LMO1P25800 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.59■□□□□ 0.25
LMO1P25800 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.59■□□□□ 0.25
LMO1P25800 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.59■□□□□ 0.25
LMO1P25800 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.59■□□□□ 0.25
LMO1P25800 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.59■□□□□ 0.25
LMO1P25800 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.59■□□□□ 0.25
LMO1P25800 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 AP000974.1-201ENST00000623909 2387 ntBASIC16.59■□□□□ 0.25
LMO1P25800 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LMO1P25800 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LMO1P25800 TREX1-205ENST00000625293 1783 ntBASIC16.59■□□□□ 0.25
LMO1P25800 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.59■□□□□ 0.25
LMO1P25800 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.25
LMO1P25800 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.58■□□□□ 0.25
LMO1P25800 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LMO1P25800 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.58■□□□□ 0.25
LMO1P25800 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LMO1P25800 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LMO1P25800 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.58■□□□□ 0.24
LMO1P25800 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LMO1P25800 DUSP5P2-201ENST00000426873 1033 ntBASIC16.58■□□□□ 0.24
LMO1P25800 AC091874.3-201ENST00000512672 1195 ntBASIC16.58■□□□□ 0.24
LMO1P25800 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.58■□□□□ 0.24
LMO1P25800 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.58■□□□□ 0.24
LMO1P25800 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.58■□□□□ 0.24
LMO1P25800 AC005829.2-201ENST00000571422 1056 ntBASIC16.58■□□□□ 0.24
LMO1P25800 MIR4758-201ENST00000577688 71 ntBASIC16.58■□□□□ 0.24
LMO1P25800 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LMO1P25800 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.58■□□□□ 0.24
LMO1P25800 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.58■□□□□ 0.24
LMO1P25800 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.58■□□□□ 0.24
LMO1P25800 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.58■□□□□ 0.24
LMO1P25800 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.58■□□□□ 0.24
LMO1P25800 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.58■□□□□ 0.24
LMO1P25800 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.58■□□□□ 0.24
LMO1P25800 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LMO1P25800 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LMO1P25800 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO1P25800 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LMO1P25800 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.57■□□□□ 0.24
LMO1P25800 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LMO1P25800 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.57■□□□□ 0.24
LMO1P25800 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LMO1P25800 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LMO1P25800 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.57■□□□□ 0.24
LMO1P25800 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms