Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHMP24386 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP24386 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP24386 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP24386 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.44■□□□□ 0.54
CHMP24386 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 AL691432.2-201ENST00000607222 2038 ntBASIC18.44■□□□□ 0.54
CHMP24386 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.44■□□□□ 0.54
CHMP24386 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP24386 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CHMP24386 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.43■□□□□ 0.54
CHMP24386 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP24386 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP24386 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHMP24386 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
CHMP24386 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP24386 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP24386 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP24386 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP24386 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP24386 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP24386 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP24386 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP24386 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP24386 TMEM179-206ENST00000616017 1645 ntBASIC18.42■□□□□ 0.54
CHMP24386 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CHMP24386 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP24386 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP24386 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP24386 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP24386 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP24386 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP24386 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CHMP24386 AC083880.1-201ENST00000608266 535 ntBASIC18.42■□□□□ 0.54
CHMP24386 AL356652.1-201ENST00000615962 565 ntBASIC18.42■□□□□ 0.54
CHMP24386 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.42■□□□□ 0.54
CHMP24386 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.42■□□□□ 0.54
CHMP24386 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CHMP24386 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHMP24386 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP24386 AP000974.1-201ENST00000623909 2387 ntBASIC18.41■□□□□ 0.54
CHMP24386 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP24386 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP24386 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP24386 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.41■□□□□ 0.54
CHMP24386 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.41■□□□□ 0.54
CHMP24386 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CHMP24386 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.41■□□□□ 0.54
CHMP24386 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHMP24386 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 DPP3P2-201ENST00000416030 1696 ntBASIC18.41■□□□□ 0.54
CHMP24386 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHMP24386 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP24386 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP24386 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP24386 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP24386 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP24386 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP24386 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP24386 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP24386 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP24386 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms