Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP8P22894 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MMP8P22894 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.82■□□□□ 0.92
MMP8P22894 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP8P22894 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
MMP8P22894 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP8P22894 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP8P22894 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP8P22894 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP8P22894 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.81■□□□□ 0.92
MMP8P22894 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
MMP8P22894 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP8P22894 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP8P22894 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.81■□□□□ 0.92
MMP8P22894 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.81■□□□□ 0.92
MMP8P22894 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MMP8P22894 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.81■□□□□ 0.92
MMP8P22894 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP8P22894 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP8P22894 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
MMP8P22894 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP8P22894 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MMP8P22894 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.81■□□□□ 0.92
MMP8P22894 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.8■□□□□ 0.92
MMP8P22894 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.8■□□□□ 0.92
MMP8P22894 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MMP8P22894 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.8■□□□□ 0.92
MMP8P22894 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.8■□□□□ 0.92
MMP8P22894 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.8■□□□□ 0.92
MMP8P22894 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
MMP8P22894 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
MMP8P22894 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MMP8P22894 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MMP8P22894 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.79■□□□□ 0.92
MMP8P22894 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP8P22894 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP8P22894 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.79■□□□□ 0.92
MMP8P22894 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP8P22894 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.79■□□□□ 0.92
MMP8P22894 SOX15-203ENST00000570788 1093 ntBASIC20.79■□□□□ 0.92
MMP8P22894 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.79■□□□□ 0.92
MMP8P22894 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MMP8P22894 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.79■□□□□ 0.92
MMP8P22894 AC120498.8-201ENST00000614275 531 ntBASIC20.79■□□□□ 0.92
MMP8P22894 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP8P22894 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP8P22894 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.78■□□□□ 0.92
MMP8P22894 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
MMP8P22894 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.78■□□□□ 0.92
MMP8P22894 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MMP8P22894 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.78■□□□□ 0.92
MMP8P22894 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.78■□□□□ 0.92
MMP8P22894 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.78■□□□□ 0.92
MMP8P22894 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
MMP8P22894 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MMP8P22894 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.78■□□□□ 0.92
MMP8P22894 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
MMP8P22894 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP8P22894 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
MMP8P22894 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP8P22894 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MMP8P22894 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MMP8P22894 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP8P22894 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP8P22894 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP8P22894 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP8P22894 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP8P22894 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms