Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NR4A1P22736 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.28■□□□□ 0.52
NR4A1P22736 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR4A1P22736 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.28■□□□□ 0.52
NR4A1P22736 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NR4A1P22736 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.28■□□□□ 0.52
NR4A1P22736 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.28■□□□□ 0.52
NR4A1P22736 AC016769.1-201ENST00000409132 1010 ntBASIC18.28■□□□□ 0.52
NR4A1P22736 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.28■□□□□ 0.52
NR4A1P22736 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.28■□□□□ 0.52
NR4A1P22736 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.28■□□□□ 0.52
NR4A1P22736 AP001160.3-201ENST00000601484 763 ntBASIC18.28■□□□□ 0.52
NR4A1P22736 AC092437.1-201ENST00000624794 1048 ntBASIC18.28■□□□□ 0.52
NR4A1P22736 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NR4A1P22736 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NR4A1P22736 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR4A1P22736 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.28■□□□□ 0.52
NR4A1P22736 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NR4A1P22736 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.27■□□□□ 0.52
NR4A1P22736 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
NR4A1P22736 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.27■□□□□ 0.52
NR4A1P22736 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NR4A1P22736 AC006015.1-201ENST00000429970 570 ntBASIC18.27■□□□□ 0.52
NR4A1P22736 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
NR4A1P22736 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR4A1P22736 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.27■□□□□ 0.52
NR4A1P22736 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NR4A1P22736 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NR4A1P22736 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR4A1P22736 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR4A1P22736 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR4A1P22736 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NR4A1P22736 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR4A1P22736 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.26■□□□□ 0.51
NR4A1P22736 KRT18P11-201ENST00000435214 1283 ntBASIC18.26■□□□□ 0.51
NR4A1P22736 AC010141.2-201ENST00000452426 721 ntBASIC18.26■□□□□ 0.51
NR4A1P22736 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR4A1P22736 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.26■□□□□ 0.51
NR4A1P22736 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.26■□□□□ 0.51
NR4A1P22736 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.26■□□□□ 0.51
NR4A1P22736 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.26■□□□□ 0.51
NR4A1P22736 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.26■□□□□ 0.51
NR4A1P22736 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.26■□□□□ 0.51
NR4A1P22736 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.26■□□□□ 0.51
NR4A1P22736 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.26■□□□□ 0.51
NR4A1P22736 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR4A1P22736 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.26■□□□□ 0.51
NR4A1P22736 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.26■□□□□ 0.51
NR4A1P22736 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.25■□□□□ 0.51
NR4A1P22736 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
NR4A1P22736 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
NR4A1P22736 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.25■□□□□ 0.51
NR4A1P22736 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.25■□□□□ 0.51
NR4A1P22736 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.25■□□□□ 0.51
NR4A1P22736 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.25■□□□□ 0.51
NR4A1P22736 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
NR4A1P22736 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NR4A1P22736 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.25■□□□□ 0.51
NR4A1P22736 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NR4A1P22736 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NR4A1P22736 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.24■□□□□ 0.51
NR4A1P22736 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.24■□□□□ 0.51
NR4A1P22736 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NR4A1P22736 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.24■□□□□ 0.51
NR4A1P22736 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NR4A1P22736 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.24■□□□□ 0.51
NR4A1P22736 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.24■□□□□ 0.51
NR4A1P22736 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
NR4A1P22736 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms