Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DPA1P20036 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 AC018553.1-201ENST00000616682 1458 ntBASIC19.94■□□□□ 0.78
HLA-DPA1P20036 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 SOX15-203ENST00000570788 1093 ntBASIC19.94■□□□□ 0.78
HLA-DPA1P20036 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 AFG3L1P-217ENST00000557444 2447 ntBASIC19.94■□□□□ 0.78
HLA-DPA1P20036 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DPA1P20036 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 RPS2P52-201ENST00000469610 820 ntBASIC19.93■□□□□ 0.78
HLA-DPA1P20036 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DPA1P20036 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 UNC93B5-201ENST00000530315 699 ntBASIC19.92■□□□□ 0.78
HLA-DPA1P20036 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 AC120498.8-201ENST00000614275 531 ntBASIC19.92■□□□□ 0.78
HLA-DPA1P20036 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DPA1P20036 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 UNC93B4-201ENST00000505679 747 ntBASIC19.91■□□□□ 0.78
HLA-DPA1P20036 AC008687.6-201ENST00000596318 630 ntBASIC19.91■□□□□ 0.78
HLA-DPA1P20036 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms