Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.36■□□□□ 0.85
ERCC2P18074 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ERCC2P18074 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.36■□□□□ 0.85
ERCC2P18074 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.36■□□□□ 0.85
ERCC2P18074 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC2P18074 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC2P18074 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC2P18074 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.35■□□□□ 0.85
ERCC2P18074 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC2P18074 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ERCC2P18074 TFP1-202ENST00000475455 1573 ntBASIC20.35■□□□□ 0.85
ERCC2P18074 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC2P18074 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC2P18074 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ERCC2P18074 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC2P18074 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
ERCC2P18074 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC2P18074 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.35■□□□□ 0.85
ERCC2P18074 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC2P18074 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC2P18074 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC2P18074 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.34■□□□□ 0.85
ERCC2P18074 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC2P18074 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC2P18074 AP003097.1-201ENST00000530657 1135 ntBASIC20.34■□□□□ 0.85
ERCC2P18074 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ERCC2P18074 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC2P18074 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.34■□□□□ 0.85
ERCC2P18074 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ERCC2P18074 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC2P18074 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC2P18074 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.34■□□□□ 0.85
ERCC2P18074 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC2P18074 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC2P18074 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.34■□□□□ 0.85
ERCC2P18074 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ERCC2P18074 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.34■□□□□ 0.85
ERCC2P18074 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ERCC2P18074 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC2P18074 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC2P18074 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC2P18074 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.33■□□□□ 0.85
ERCC2P18074 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ERCC2P18074 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC2P18074 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ERCC2P18074 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC2P18074 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ERCC2P18074 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ERCC2P18074 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC2P18074 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.85
ERCC2P18074 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.33■□□□□ 0.85
ERCC2P18074 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ERCC2P18074 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC2P18074 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.33■□□□□ 0.85
ERCC2P18074 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.33■□□□□ 0.85
ERCC2P18074 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC2P18074 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.33■□□□□ 0.85
ERCC2P18074 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.33■□□□□ 0.85
ERCC2P18074 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.33■□□□□ 0.85
ERCC2P18074 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ERCC2P18074 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ERCC2P18074 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ERCC2P18074 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.33■□□□□ 0.84
ERCC2P18074 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC2P18074 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC2P18074 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC2P18074 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ERCC2P18074 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
ERCC2P18074 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.32■□□□□ 0.84
ERCC2P18074 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ERCC2P18074 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.32■□□□□ 0.84
ERCC2P18074 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.32■□□□□ 0.84
ERCC2P18074 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ERCC2P18074 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ERCC2P18074 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.32■□□□□ 0.84
ERCC2P18074 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.32■□□□□ 0.84
ERCC2P18074 POM121L13P-201ENST00000422362 380 ntBASIC20.32■□□□□ 0.84
ERCC2P18074 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.32■□□□□ 0.84
ERCC2P18074 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.32■□□□□ 0.84
ERCC2P18074 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ERCC2P18074 AC026366.1-201ENST00000488803 879 ntBASIC20.32■□□□□ 0.84
ERCC2P18074 CD99P1-205ENST00000527459 561 ntBASIC20.32■□□□□ 0.84
ERCC2P18074 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.32■□□□□ 0.84
ERCC2P18074 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ERCC2P18074 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.32■□□□□ 0.84
ERCC2P18074 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ERCC2P18074 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ERCC2P18074 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.31■□□□□ 0.84
ERCC2P18074 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms