Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CCR12P-201ENST00000446203 998 ntBASIC24.35■■□□□ 1.49
COL11A2P13942 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.35■■□□□ 1.49
COL11A2P13942 COX11P1-201ENST00000489116 835 ntBASIC24.35■■□□□ 1.49
COL11A2P13942 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.35■■□□□ 1.49
COL11A2P13942 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.35■■□□□ 1.49
COL11A2P13942 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.35■■□□□ 1.49
COL11A2P13942 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.35■■□□□ 1.49
COL11A2P13942 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.35■■□□□ 1.49
COL11A2P13942 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.35■■□□□ 1.49
COL11A2P13942 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.35■■□□□ 1.49
COL11A2P13942 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.35■■□□□ 1.49
COL11A2P13942 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC24.35■■□□□ 1.49
COL11A2P13942 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC24.35■■□□□ 1.49
COL11A2P13942 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
COL11A2P13942 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 HCG4P8-203ENST00000443049 980 ntBASIC24.35■■□□□ 1.49
COL11A2P13942 AC092647.4-201ENST00000457211 535 ntBASIC24.35■■□□□ 1.49
COL11A2P13942 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.35■■□□□ 1.49
COL11A2P13942 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.35■■□□□ 1.49
COL11A2P13942 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
COL11A2P13942 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COL11A2P13942 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL11A2P13942 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
COL11A2P13942 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL11A2P13942 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
COL11A2P13942 AC069148.1-201ENST00000608741 768 ntBASIC24.34■■□□□ 1.49
COL11A2P13942 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL11A2P13942 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
COL11A2P13942 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL11A2P13942 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.34■■□□□ 1.49
COL11A2P13942 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.34■■□□□ 1.49
COL11A2P13942 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COL11A2P13942 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL11A2P13942 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
COL11A2P13942 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COL11A2P13942 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COL11A2P13942 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.33■■□□□ 1.49
COL11A2P13942 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.33■■□□□ 1.49
COL11A2P13942 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.33■■□□□ 1.49
COL11A2P13942 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.33■■□□□ 1.49
COL11A2P13942 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.32■■□□□ 1.48
COL11A2P13942 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.32■■□□□ 1.48
COL11A2P13942 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.32■■□□□ 1.48
COL11A2P13942 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC24.32■■□□□ 1.48
COL11A2P13942 AL023973.1-201ENST00000624619 620 ntBASIC24.32■■□□□ 1.48
COL11A2P13942 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
COL11A2P13942 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
COL11A2P13942 TSPY5P-201ENST00000426936 936 ntBASIC24.32■■□□□ 1.48
COL11A2P13942 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 KRT18P38-201ENST00000449496 1282 ntBASIC24.32■■□□□ 1.48
COL11A2P13942 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.32■■□□□ 1.48
COL11A2P13942 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.32■■□□□ 1.48
COL11A2P13942 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.32■■□□□ 1.48
COL11A2P13942 KRT126P-201ENST00000549467 1181 ntBASIC24.32■■□□□ 1.48
COL11A2P13942 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.32■■□□□ 1.48
COL11A2P13942 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 AC116562.4-202ENST00000641738 218 ntBASIC24.32■■□□□ 1.48
COL11A2P13942 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.32■■□□□ 1.48
COL11A2P13942 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.32■■□□□ 1.48
COL11A2P13942 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.32■■□□□ 1.48
COL11A2P13942 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL11A2P13942 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.31■■□□□ 1.48
COL11A2P13942 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.31■■□□□ 1.48
COL11A2P13942 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL11A2P13942 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL11A2P13942 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL11A2P13942 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
COL11A2P13942 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL11A2P13942 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL11A2P13942 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.31■■□□□ 1.48
COL11A2P13942 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC24.31■■□□□ 1.48
COL11A2P13942 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.31■■□□□ 1.48
COL11A2P13942 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.31■■□□□ 1.48
COL11A2P13942 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC24.31■■□□□ 1.48
COL11A2P13942 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
COL11A2P13942 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.31■■□□□ 1.48
COL11A2P13942 AL441883.1-201ENST00000566170 1045 ntBASIC24.31■■□□□ 1.48
COL11A2P13942 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC24.31■■□□□ 1.48
COL11A2P13942 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.31■■□□□ 1.48
COL11A2P13942 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
COL11A2P13942 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.31■■□□□ 1.48
COL11A2P13942 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.3■■□□□ 1.48
COL11A2P13942 IER3-202ENST00000376377 1350 ntBASIC24.3■■□□□ 1.48
COL11A2P13942 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
COL11A2P13942 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.3■■□□□ 1.48
COL11A2P13942 AL671277.2-201ENST00000458060 996 ntBASIC24.3■■□□□ 1.48
COL11A2P13942 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
COL11A2P13942 PLK5-205ENST00000642079 1969 ntBASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms