Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOBP13765 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DOBP13765 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DOBP13765 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
HLA-DOBP13765 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HLA-DOBP13765 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DOBP13765 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 AL390719.1-204ENST00000412397 1219 ntBASIC17.71■□□□□ 0.43
HLA-DOBP13765 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.71■□□□□ 0.43
HLA-DOBP13765 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.71■□□□□ 0.43
HLA-DOBP13765 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.71■□□□□ 0.43
HLA-DOBP13765 HLA-B-256ENST00000639848 1089 ntBASIC17.71■□□□□ 0.43
HLA-DOBP13765 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DOBP13765 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
HLA-DOBP13765 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
HLA-DOBP13765 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
HLA-DOBP13765 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 AC124283.5-201ENST00000624661 1809 ntBASIC17.7■□□□□ 0.42
HLA-DOBP13765 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DOBP13765 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DOBP13765 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.69■□□□□ 0.42
HLA-DOBP13765 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.69■□□□□ 0.42
HLA-DOBP13765 PNMA6B-201ENST00000538162 1200 ntBASIC17.69■□□□□ 0.42
HLA-DOBP13765 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 AP001271.2-201ENST00000624018 1556 ntBASIC17.69■□□□□ 0.42
HLA-DOBP13765 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DOBP13765 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DOBP13765 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DOBP13765 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DOBP13765 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DOBP13765 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DOBP13765 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DOBP13765 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DOBP13765 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DOBP13765 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DOBP13765 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DOBP13765 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DOBP13765 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.68■□□□□ 0.42
HLA-DOBP13765 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.68■□□□□ 0.42
HLA-DOBP13765 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
HLA-DOBP13765 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DOBP13765 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms