Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.95■□□□□ 0.78
RETP07949 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.95■□□□□ 0.78
RETP07949 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.95■□□□□ 0.78
RETP07949 AC010203.1-204ENST00000548782 407 ntBASIC19.95■□□□□ 0.78
RETP07949 AL121906.2-201ENST00000621597 723 ntBASIC19.95■□□□□ 0.78
RETP07949 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.95■□□□□ 0.78
RETP07949 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.95■□□□□ 0.78
RETP07949 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.95■□□□□ 0.78
RETP07949 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RETP07949 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RETP07949 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
RETP07949 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.94■□□□□ 0.78
RETP07949 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RETP07949 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.94■□□□□ 0.78
RETP07949 KSR1P1-201ENST00000446298 240 ntBASIC19.94■□□□□ 0.78
RETP07949 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.94■□□□□ 0.78
RETP07949 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.94■□□□□ 0.78
RETP07949 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.94■□□□□ 0.78
RETP07949 LINC01238-205ENST00000567549 1107 ntBASIC19.94■□□□□ 0.78
RETP07949 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 AC006011.2-201ENST00000621313 1158 ntBASIC19.94■□□□□ 0.78
RETP07949 CR392000.1-201ENST00000624770 1228 ntBASIC19.94■□□□□ 0.78
RETP07949 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.94■□□□□ 0.78
RETP07949 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RETP07949 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RETP07949 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.94■□□□□ 0.78
RETP07949 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RETP07949 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.93■□□□□ 0.78
RETP07949 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RETP07949 AL049796.1-201ENST00000565336 1766 ntBASIC19.93■□□□□ 0.78
RETP07949 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.93■□□□□ 0.78
RETP07949 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 AC023632.3-201ENST00000521633 145 ntBASIC19.93■□□□□ 0.78
RETP07949 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RETP07949 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
RETP07949 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.93■□□□□ 0.78
RETP07949 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.93■□□□□ 0.78
RETP07949 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RETP07949 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RETP07949 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETP07949 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.92■□□□□ 0.78
RETP07949 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETP07949 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RETP07949 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RETP07949 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.92■□□□□ 0.78
RETP07949 KRT126P-201ENST00000549467 1181 ntBASIC19.92■□□□□ 0.78
RETP07949 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.92■□□□□ 0.78
RETP07949 AL358472.4-201ENST00000633140 710 ntBASIC19.92■□□□□ 0.78
RETP07949 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RETP07949 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETP07949 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.92■□□□□ 0.78
RETP07949 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RETP07949 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RETP07949 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RETP07949 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETP07949 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.91■□□□□ 0.78
RETP07949 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETP07949 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETP07949 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
RETP07949 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
RETP07949 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETP07949 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RETP07949 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RETP07949 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RETP07949 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.91■□□□□ 0.78
RETP07949 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.91■□□□□ 0.78
RETP07949 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RETP07949 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.91■□□□□ 0.78
RETP07949 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms