Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.57■■□□□ 1.04
CHRNA1P02708 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CHRNA1P02708 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
CHRNA1P02708 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CHRNA1P02708 AL137013.1-201ENST00000432946 1228 ntBASIC21.57■■□□□ 1.04
CHRNA1P02708 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CHRNA1P02708 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.57■■□□□ 1.04
CHRNA1P02708 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.57■■□□□ 1.04
CHRNA1P02708 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRNA1P02708 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
CHRNA1P02708 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.56■■□□□ 1.04
CHRNA1P02708 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.56■■□□□ 1.04
CHRNA1P02708 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.56■■□□□ 1.04
CHRNA1P02708 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.56■■□□□ 1.04
CHRNA1P02708 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.56■■□□□ 1.04
CHRNA1P02708 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.56■■□□□ 1.04
CHRNA1P02708 AP005242.2-201ENST00000580065 1175 ntBASIC21.56■■□□□ 1.04
CHRNA1P02708 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.56■■□□□ 1.04
CHRNA1P02708 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.56■■□□□ 1.04
CHRNA1P02708 AC131212.4-201ENST00000623606 975 ntBASIC21.56■■□□□ 1.04
CHRNA1P02708 AL590326.2-201ENST00000625139 305 ntBASIC21.56■■□□□ 1.04
CHRNA1P02708 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRNA1P02708 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.55■■□□□ 1.04
CHRNA1P02708 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHRNA1P02708 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.55■■□□□ 1.04
CHRNA1P02708 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHRNA1P02708 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.55■■□□□ 1.04
CHRNA1P02708 DGCR10-201ENST00000609839 495 ntBASIC21.55■■□□□ 1.04
CHRNA1P02708 AC130371.2-201ENST00000619443 611 ntBASIC21.55■■□□□ 1.04
CHRNA1P02708 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.55■■□□□ 1.04
CHRNA1P02708 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CHRNA1P02708 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.55■■□□□ 1.04
CHRNA1P02708 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.55■■□□□ 1.04
CHRNA1P02708 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRNA1P02708 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.54■■□□□ 1.04
CHRNA1P02708 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHRNA1P02708 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.54■■□□□ 1.04
CHRNA1P02708 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRNA1P02708 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRNA1P02708 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CHRNA1P02708 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRNA1P02708 AC097488.1-201ENST00000507834 756 ntBASIC21.54■■□□□ 1.04
CHRNA1P02708 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.54■■□□□ 1.04
CHRNA1P02708 AC010203.1-204ENST00000548782 407 ntBASIC21.54■■□□□ 1.04
CHRNA1P02708 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.54■■□□□ 1.04
CHRNA1P02708 HLA-A-209ENST00000638375 975 ntBASIC21.54■■□□□ 1.04
CHRNA1P02708 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRNA1P02708 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CHRNA1P02708 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRNA1P02708 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CHRNA1P02708 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRNA1P02708 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.54■■□□□ 1.04
CHRNA1P02708 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CHRNA1P02708 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHRNA1P02708 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHRNA1P02708 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.53■■□□□ 1.04
CHRNA1P02708 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHRNA1P02708 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHRNA1P02708 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.53■■□□□ 1.04
CHRNA1P02708 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CHRNA1P02708 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHRNA1P02708 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHRNA1P02708 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.53■■□□□ 1.04
CHRNA1P02708 AC104076.2-201ENST00000448912 469 ntBASIC21.53■■□□□ 1.04
CHRNA1P02708 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHRNA1P02708 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.53■■□□□ 1.04
CHRNA1P02708 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms