Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 KSR1P1-201ENST00000446298 240 ntBASIC23.9■■□□□ 1.42
COL1A1P02452 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.9■■□□□ 1.42
COL1A1P02452 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL1A1P02452 AL390955.1-201ENST00000428694 934 ntBASIC23.89■■□□□ 1.42
COL1A1P02452 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.89■■□□□ 1.42
COL1A1P02452 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.89■■□□□ 1.42
COL1A1P02452 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.89■■□□□ 1.42
COL1A1P02452 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.89■■□□□ 1.42
COL1A1P02452 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL1A1P02452 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A1P02452 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A1P02452 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.88■■□□□ 1.41
COL1A1P02452 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.88■■□□□ 1.41
COL1A1P02452 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.88■■□□□ 1.41
COL1A1P02452 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.88■■□□□ 1.41
COL1A1P02452 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.88■■□□□ 1.41
COL1A1P02452 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A1P02452 CR392000.1-201ENST00000624770 1228 ntBASIC23.88■■□□□ 1.41
COL1A1P02452 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A1P02452 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A1P02452 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.88■■□□□ 1.41
COL1A1P02452 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A1P02452 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A1P02452 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A1P02452 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A1P02452 AC005521.1-201ENST00000393351 872 ntBASIC23.87■■□□□ 1.41
COL1A1P02452 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.87■■□□□ 1.41
COL1A1P02452 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.87■■□□□ 1.41
COL1A1P02452 AC116562.2-201ENST00000507042 360 ntBASIC23.87■■□□□ 1.41
COL1A1P02452 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.87■■□□□ 1.41
COL1A1P02452 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.87■■□□□ 1.41
COL1A1P02452 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A1P02452 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.87■■□□□ 1.41
COL1A1P02452 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A1P02452 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.87■■□□□ 1.41
COL1A1P02452 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.87■■□□□ 1.41
COL1A1P02452 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
COL1A1P02452 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.87■■□□□ 1.41
COL1A1P02452 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
COL1A1P02452 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A1P02452 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.87■■□□□ 1.41
COL1A1P02452 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A1P02452 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
COL1A1P02452 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
COL1A1P02452 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.87■■□□□ 1.41
COL1A1P02452 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.87■■□□□ 1.41
COL1A1P02452 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.87■■□□□ 1.41
COL1A1P02452 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.87■■□□□ 1.41
COL1A1P02452 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.87■■□□□ 1.41
COL1A1P02452 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.87■■□□□ 1.41
COL1A1P02452 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.87■■□□□ 1.41
COL1A1P02452 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A1P02452 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A1P02452 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A1P02452 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A1P02452 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COL1A1P02452 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL1A1P02452 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.86■■□□□ 1.41
COL1A1P02452 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
COL1A1P02452 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.86■■□□□ 1.41
COL1A1P02452 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.86■■□□□ 1.41
COL1A1P02452 AL445675.2-201ENST00000620291 557 ntBASIC23.86■■□□□ 1.41
COL1A1P02452 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
COL1A1P02452 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
COL1A1P02452 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
COL1A1P02452 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 AL162377.1-201ENST00000618844 1793 ntBASIC23.85■■□□□ 1.41
COL1A1P02452 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 TERF1P1-201ENST00000311003 1181 ntBASIC23.85■■□□□ 1.41
COL1A1P02452 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.85■■□□□ 1.41
COL1A1P02452 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
COL1A1P02452 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.85■■□□□ 1.41
COL1A1P02452 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.85■■□□□ 1.41
COL1A1P02452 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.85■■□□□ 1.41
COL1A1P02452 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.85■■□□□ 1.41
COL1A1P02452 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.85■■□□□ 1.41
COL1A1P02452 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.85■■□□□ 1.41
COL1A1P02452 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.85■■□□□ 1.41
COL1A1P02452 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
COL1A1P02452 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.85■■□□□ 1.41
COL1A1P02452 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
COL1A1P02452 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL1A1P02452 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL1A1P02452 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms