Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-CO1P00395 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.24■□□□□ 0.83
MT-CO1P00395 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.24■□□□□ 0.83
MT-CO1P00395 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.24■□□□□ 0.83
MT-CO1P00395 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-CO1P00395 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.24■□□□□ 0.83
MT-CO1P00395 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.24■□□□□ 0.83
MT-CO1P00395 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-CO1P00395 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.24■□□□□ 0.83
MT-CO1P00395 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
MT-CO1P00395 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.24■□□□□ 0.83
MT-CO1P00395 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
MT-CO1P00395 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-CO1P00395 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-CO1P00395 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-CO1P00395 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-CO1P00395 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-CO1P00395 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
MT-CO1P00395 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
MT-CO1P00395 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 KRASP1-201ENST00000407852 552 ntBASIC20.23■□□□□ 0.83
MT-CO1P00395 AC239809.2-201ENST00000415381 517 ntBASIC20.23■□□□□ 0.83
MT-CO1P00395 UBE2SP1-201ENST00000450587 669 ntBASIC20.23■□□□□ 0.83
MT-CO1P00395 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.23■□□□□ 0.83
MT-CO1P00395 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.23■□□□□ 0.83
MT-CO1P00395 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.23■□□□□ 0.83
MT-CO1P00395 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.23■□□□□ 0.83
MT-CO1P00395 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
MT-CO1P00395 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.23■□□□□ 0.83
MT-CO1P00395 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.23■□□□□ 0.83
MT-CO1P00395 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.23■□□□□ 0.83
MT-CO1P00395 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.23■□□□□ 0.83
MT-CO1P00395 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-CO1P00395 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 GABARAPL3-202ENST00000624044 1851 ntBASIC20.22■□□□□ 0.83
MT-CO1P00395 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 AL162377.1-201ENST00000618844 1793 ntBASIC20.22■□□□□ 0.83
MT-CO1P00395 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
MT-CO1P00395 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 AC133681.1-201ENST00000465482 601 ntBASIC20.22■□□□□ 0.83
MT-CO1P00395 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.22■□□□□ 0.83
MT-CO1P00395 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.22■□□□□ 0.83
MT-CO1P00395 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.22■□□□□ 0.83
MT-CO1P00395 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.22■□□□□ 0.83
MT-CO1P00395 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.22■□□□□ 0.83
MT-CO1P00395 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.22■□□□□ 0.83
MT-CO1P00395 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MT-CO1P00395 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.22■□□□□ 0.83
MT-CO1P00395 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.22■□□□□ 0.83
MT-CO1P00395 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-CO1P00395 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.22■□□□□ 0.83
MT-CO1P00395 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-CO1P00395 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 KRT16P6-202ENST00000425692 1426 ntBASIC20.21■□□□□ 0.83
MT-CO1P00395 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.21■□□□□ 0.83
MT-CO1P00395 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-CO1P00395 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-CO1P00395 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-CO1P00395 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-CO1P00395 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.21■□□□□ 0.83
MT-CO1P00395 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-CO1P00395 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-CO1P00395 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
MT-CO1P00395 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
MT-CO1P00395 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.2■□□□□ 0.82
MT-CO1P00395 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.2■□□□□ 0.82
MT-CO1P00395 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-CO1P00395 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms