Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.59■□□□□ 0.57
CLPTM1O96005 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.59■□□□□ 0.57
CLPTM1O96005 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.59■□□□□ 0.57
CLPTM1O96005 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.59■□□□□ 0.57
CLPTM1O96005 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
CLPTM1O96005 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLPTM1O96005 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLPTM1O96005 RARRES2P6-201ENST00000567333 442 ntBASIC18.59■□□□□ 0.57
CLPTM1O96005 SMUG1P1-201ENST00000590640 811 ntBASIC18.59■□□□□ 0.57
CLPTM1O96005 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.59■□□□□ 0.57
CLPTM1O96005 AL354811.1-201ENST00000610286 706 ntBASIC18.59■□□□□ 0.57
CLPTM1O96005 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CLPTM1O96005 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPTM1O96005 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CLPTM1O96005 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
CLPTM1O96005 AC135050.7-201ENST00000624508 2218 ntBASIC18.58■□□□□ 0.57
CLPTM1O96005 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CLPTM1O96005 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLPTM1O96005 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CLPTM1O96005 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLPTM1O96005 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CLPTM1O96005 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.58■□□□□ 0.56
CLPTM1O96005 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.58■□□□□ 0.56
CLPTM1O96005 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.58■□□□□ 0.56
CLPTM1O96005 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLPTM1O96005 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLPTM1O96005 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.58■□□□□ 0.56
CLPTM1O96005 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLPTM1O96005 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLPTM1O96005 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLPTM1O96005 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.58■□□□□ 0.56
CLPTM1O96005 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLPTM1O96005 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CLPTM1O96005 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.58■□□□□ 0.56
CLPTM1O96005 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLPTM1O96005 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLPTM1O96005 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.57■□□□□ 0.56
CLPTM1O96005 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLPTM1O96005 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.57■□□□□ 0.56
CLPTM1O96005 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLPTM1O96005 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLPTM1O96005 AC026271.2-201ENST00000428091 497 ntBASIC18.57■□□□□ 0.56
CLPTM1O96005 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.57■□□□□ 0.56
CLPTM1O96005 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.57■□□□□ 0.56
CLPTM1O96005 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.57■□□□□ 0.56
CLPTM1O96005 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLPTM1O96005 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLPTM1O96005 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.57■□□□□ 0.56
CLPTM1O96005 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLPTM1O96005 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CLPTM1O96005 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CLPTM1O96005 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
CLPTM1O96005 AC009113.1-201ENST00000570267 2443 ntBASIC18.57■□□□□ 0.56
CLPTM1O96005 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CLPTM1O96005 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.56■□□□□ 0.56
CLPTM1O96005 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.56■□□□□ 0.56
CLPTM1O96005 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.56■□□□□ 0.56
CLPTM1O96005 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLPTM1O96005 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.56■□□□□ 0.56
CLPTM1O96005 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.56■□□□□ 0.56
CLPTM1O96005 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLPTM1O96005 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.56■□□□□ 0.56
CLPTM1O96005 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.56■□□□□ 0.56
CLPTM1O96005 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.56■□□□□ 0.56
CLPTM1O96005 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.56■□□□□ 0.56
CLPTM1O96005 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.56■□□□□ 0.56
CLPTM1O96005 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLPTM1O96005 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms