Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN11O75508 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN11O75508 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN11O75508 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CLDN11O75508 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN11O75508 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLDN11O75508 AC009237.14-201ENST00000609975 1594 ntBASIC20.22■□□□□ 0.83
CLDN11O75508 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLDN11O75508 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN11O75508 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN11O75508 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CLDN11O75508 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.22■□□□□ 0.83
CLDN11O75508 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.22■□□□□ 0.83
CLDN11O75508 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CLDN11O75508 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN11O75508 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.21■□□□□ 0.83
CLDN11O75508 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN11O75508 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN11O75508 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN11O75508 AC008550.1-201ENST00000511500 884 ntBASIC20.21■□□□□ 0.83
CLDN11O75508 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.21■□□□□ 0.83
CLDN11O75508 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.21■□□□□ 0.83
CLDN11O75508 RARRES2P10-201ENST00000564312 460 ntBASIC20.21■□□□□ 0.83
CLDN11O75508 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.21■□□□□ 0.83
CLDN11O75508 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDN11O75508 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN11O75508 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN11O75508 AL135905.2-201ENST00000584934 1404 ntBASIC20.2■□□□□ 0.82
CLDN11O75508 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN11O75508 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN11O75508 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN11O75508 TCF3P1-201ENST00000423021 1937 ntBASIC20.2■□□□□ 0.82
CLDN11O75508 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN11O75508 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CLDN11O75508 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLDN11O75508 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN11O75508 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.2■□□□□ 0.82
CLDN11O75508 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLDN11O75508 AC093827.2-201ENST00000512654 315 ntBASIC20.2■□□□□ 0.82
CLDN11O75508 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN11O75508 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN11O75508 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLDN11O75508 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLDN11O75508 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN11O75508 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CLDN11O75508 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN11O75508 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN11O75508 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN11O75508 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN11O75508 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN11O75508 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN11O75508 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN11O75508 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.19■□□□□ 0.82
CLDN11O75508 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN11O75508 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN11O75508 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDN11O75508 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms