Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
EXTL3O43909 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.48■■□□□ 1.03
EXTL3O43909 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
EXTL3O43909 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
EXTL3O43909 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EXTL3O43909 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.48■■□□□ 1.03
EXTL3O43909 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EXTL3O43909 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EXTL3O43909 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
EXTL3O43909 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
EXTL3O43909 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
EXTL3O43909 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.47■■□□□ 1.03
EXTL3O43909 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.47■■□□□ 1.03
EXTL3O43909 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.47■■□□□ 1.03
EXTL3O43909 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.47■■□□□ 1.03
EXTL3O43909 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.47■■□□□ 1.03
EXTL3O43909 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.47■■□□□ 1.03
EXTL3O43909 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.47■■□□□ 1.03
EXTL3O43909 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.47■■□□□ 1.03
EXTL3O43909 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
EXTL3O43909 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EXTL3O43909 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
EXTL3O43909 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EXTL3O43909 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EXTL3O43909 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
EXTL3O43909 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.46■■□□□ 1.03
EXTL3O43909 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.46■■□□□ 1.03
EXTL3O43909 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.46■■□□□ 1.03
EXTL3O43909 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.46■■□□□ 1.03
EXTL3O43909 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
EXTL3O43909 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EXTL3O43909 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.46■■□□□ 1.03
EXTL3O43909 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EXTL3O43909 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
EXTL3O43909 PCDHAC2-203ENST00000615316 3011 ntBASIC21.46■■□□□ 1.03
EXTL3O43909 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
EXTL3O43909 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.46■■□□□ 1.03
EXTL3O43909 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EXTL3O43909 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.46■■□□□ 1.03
EXTL3O43909 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EXTL3O43909 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EXTL3O43909 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.45■■□□□ 1.03
EXTL3O43909 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EXTL3O43909 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.45■■□□□ 1.02
EXTL3O43909 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.45■■□□□ 1.02
EXTL3O43909 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EXTL3O43909 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EXTL3O43909 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EXTL3O43909 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.45■■□□□ 1.02
EXTL3O43909 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EXTL3O43909 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
EXTL3O43909 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.45■■□□□ 1.02
EXTL3O43909 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.45■■□□□ 1.02
EXTL3O43909 AL023875.1-201ENST00000640777 796 ntBASIC21.45■■□□□ 1.02
EXTL3O43909 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EXTL3O43909 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EXTL3O43909 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.45■■□□□ 1.02
EXTL3O43909 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.45■■□□□ 1.02
EXTL3O43909 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EXTL3O43909 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EXTL3O43909 AP006587.1-201ENST00000534129 1502 ntBASIC21.45■■□□□ 1.02
EXTL3O43909 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.44■■□□□ 1.02
EXTL3O43909 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXTL3O43909 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
EXTL3O43909 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXTL3O43909 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.44■■□□□ 1.02
EXTL3O43909 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EXTL3O43909 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.44■■□□□ 1.02
EXTL3O43909 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EXTL3O43909 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXTL3O43909 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.44■■□□□ 1.02
EXTL3O43909 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.44■■□□□ 1.02
EXTL3O43909 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.44■■□□□ 1.02
EXTL3O43909 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.44■■□□□ 1.02
EXTL3O43909 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.44■■□□□ 1.02
EXTL3O43909 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXTL3O43909 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
EXTL3O43909 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.44■■□□□ 1.02
EXTL3O43909 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXTL3O43909 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
EXTL3O43909 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.43■■□□□ 1.02
EXTL3O43909 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EXTL3O43909 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.43■■□□□ 1.02
EXTL3O43909 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EXTL3O43909 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
EXTL3O43909 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.43■■□□□ 1.02
EXTL3O43909 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.43■■□□□ 1.02
EXTL3O43909 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.43■■□□□ 1.02
EXTL3O43909 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms