Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCP110O43303 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.68■■□□□ 1.06
CCP110O43303 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CCP110O43303 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCP110O43303 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCP110O43303 LINC01465-201ENST00000408887 1940 ntBASIC21.68■■□□□ 1.06
CCP110O43303 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCP110O43303 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCP110O43303 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCP110O43303 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.68■■□□□ 1.06
CCP110O43303 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCP110O43303 AC090340.1-201ENST00000620778 4980 ntBASIC21.67■■□□□ 1.06
CCP110O43303 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 NEFHP1-201ENST00000412845 2629 ntBASIC21.67■■□□□ 1.06
CCP110O43303 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.67■■□□□ 1.06
CCP110O43303 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.67■■□□□ 1.06
CCP110O43303 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CCP110O43303 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
CCP110O43303 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.67■■□□□ 1.06
CCP110O43303 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.67■■□□□ 1.06
CCP110O43303 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.67■■□□□ 1.06
CCP110O43303 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.67■■□□□ 1.06
CCP110O43303 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCP110O43303 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.67■■□□□ 1.06
CCP110O43303 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.66■■□□□ 1.06
CCP110O43303 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 KRT8P36-201ENST00000489121 1440 ntBASIC21.66■■□□□ 1.06
CCP110O43303 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.66■■□□□ 1.06
CCP110O43303 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 LETM1P2-201ENST00000597330 2178 ntBASIC21.66■■□□□ 1.06
CCP110O43303 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.66■■□□□ 1.06
CCP110O43303 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 AL162430.1-201ENST00000480705 870 ntBASIC21.66■■□□□ 1.06
CCP110O43303 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.66■■□□□ 1.06
CCP110O43303 SLC7A5P1-201ENST00000568957 537 ntBASIC21.66■■□□□ 1.06
CCP110O43303 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.66■■□□□ 1.06
CCP110O43303 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.66■■□□□ 1.06
CCP110O43303 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CCP110O43303 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CCP110O43303 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCP110O43303 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.66■■□□□ 1.06
CCP110O43303 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.66■■□□□ 1.06
CCP110O43303 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCP110O43303 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.66■■□□□ 1.06
CCP110O43303 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCP110O43303 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CCP110O43303 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCP110O43303 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.65■■□□□ 1.06
CCP110O43303 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.65■■□□□ 1.06
CCP110O43303 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.65■■□□□ 1.06
CCP110O43303 MIR5787-201ENST00000611784 55 ntBASIC21.65■■□□□ 1.06
CCP110O43303 MYCNOS-205ENST00000641950 531 ntBASIC21.65■■□□□ 1.06
CCP110O43303 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCP110O43303 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCP110O43303 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.65■■□□□ 1.06
CCP110O43303 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCP110O43303 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
CCP110O43303 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCP110O43303 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
CCP110O43303 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCP110O43303 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CCP110O43303 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCP110O43303 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCP110O43303 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCP110O43303 RBM17P2-201ENST00000616397 1405 ntBASIC21.64■■□□□ 1.06
CCP110O43303 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.64■■□□□ 1.06
CCP110O43303 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CCP110O43303 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CCP110O43303 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCP110O43303 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCP110O43303 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCP110O43303 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCP110O43303 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCP110O43303 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CCP110O43303 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.64■■□□□ 1.05
CCP110O43303 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CCP110O43303 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCP110O43303 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.64■■□□□ 1.05
CCP110O43303 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCP110O43303 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.64■■□□□ 1.05
CCP110O43303 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.64■■□□□ 1.05
CCP110O43303 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms