Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF113AO15541 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.77■■□□□ 1.4
RNF113AO15541 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF113AO15541 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.77■■□□□ 1.4
RNF113AO15541 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF113AO15541 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF113AO15541 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF113AO15541 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF113AO15541 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF113AO15541 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF113AO15541 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF113AO15541 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.77■■□□□ 1.4
RNF113AO15541 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF113AO15541 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF113AO15541 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RNF113AO15541 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF113AO15541 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF113AO15541 NBPF21P-201ENST00000425093 1451 ntBASIC23.76■■□□□ 1.39
RNF113AO15541 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RNF113AO15541 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF113AO15541 AP006587.1-201ENST00000534129 1502 ntBASIC23.76■■□□□ 1.39
RNF113AO15541 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF113AO15541 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF113AO15541 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF113AO15541 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF113AO15541 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF113AO15541 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF113AO15541 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF113AO15541 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RNF113AO15541 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF113AO15541 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF113AO15541 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF113AO15541 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF113AO15541 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF113AO15541 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF113AO15541 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF113AO15541 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RNF113AO15541 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.75■■□□□ 1.39
RNF113AO15541 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF113AO15541 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF113AO15541 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF113AO15541 PCDHAC2-203ENST00000615316 3011 ntBASIC23.75■■□□□ 1.39
RNF113AO15541 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF113AO15541 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RNF113AO15541 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF113AO15541 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
RNF113AO15541 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF113AO15541 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
RNF113AO15541 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF113AO15541 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF113AO15541 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.75■■□□□ 1.39
RNF113AO15541 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RNF113AO15541 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF113AO15541 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF113AO15541 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
RNF113AO15541 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF113AO15541 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RNF113AO15541 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF113AO15541 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF113AO15541 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF113AO15541 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.74■■□□□ 1.39
RNF113AO15541 AL158047.1-201ENST00000445918 881 ntBASIC23.74■■□□□ 1.39
RNF113AO15541 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF113AO15541 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF113AO15541 AC110285.5-201ENST00000611501 352 ntBASIC23.74■■□□□ 1.39
RNF113AO15541 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF113AO15541 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF113AO15541 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF113AO15541 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RNF113AO15541 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.73■■□□□ 1.39
RNF113AO15541 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.73■■□□□ 1.39
RNF113AO15541 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.73■■□□□ 1.39
RNF113AO15541 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.73■■□□□ 1.39
RNF113AO15541 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.73■■□□□ 1.39
RNF113AO15541 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RNF113AO15541 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
RNF113AO15541 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF113AO15541 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.72■■□□□ 1.39
RNF113AO15541 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF113AO15541 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF113AO15541 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF113AO15541 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF113AO15541 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RNF113AO15541 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.72■■□□□ 1.39
RNF113AO15541 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF113AO15541 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
RNF113AO15541 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RNF113AO15541 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
RNF113AO15541 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.72■■□□□ 1.39
RNF113AO15541 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms