Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HDAC3O15379 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.23■□□□□ 0.67
HDAC3O15379 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HDAC3O15379 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.22■□□□□ 0.67
HDAC3O15379 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HDAC3O15379 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.22■□□□□ 0.67
HDAC3O15379 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HDAC3O15379 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.22■□□□□ 0.67
HDAC3O15379 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.22■□□□□ 0.67
HDAC3O15379 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HDAC3O15379 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.22■□□□□ 0.67
HDAC3O15379 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.22■□□□□ 0.67
HDAC3O15379 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.22■□□□□ 0.67
HDAC3O15379 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDAC3O15379 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HDAC3O15379 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HDAC3O15379 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HDAC3O15379 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HDAC3O15379 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.21■□□□□ 0.67
HDAC3O15379 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
HDAC3O15379 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HDAC3O15379 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.21■□□□□ 0.67
HDAC3O15379 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HDAC3O15379 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDAC3O15379 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.21■□□□□ 0.67
HDAC3O15379 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HDAC3O15379 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC3O15379 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.2■□□□□ 0.66
HDAC3O15379 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HDAC3O15379 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HDAC3O15379 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC3O15379 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.2■□□□□ 0.66
HDAC3O15379 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.2■□□□□ 0.66
HDAC3O15379 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 KRT18P61-201ENST00000585825 1298 ntBASIC19.2■□□□□ 0.66
HDAC3O15379 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.2■□□□□ 0.66
HDAC3O15379 AC010536.3-201ENST00000620306 533 ntBASIC19.2■□□□□ 0.66
HDAC3O15379 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
HDAC3O15379 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HDAC3O15379 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.2■□□□□ 0.66
HDAC3O15379 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDAC3O15379 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HDAC3O15379 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.19■□□□□ 0.66
HDAC3O15379 AC016405.3-201ENST00000607710 860 ntBASIC19.19■□□□□ 0.66
HDAC3O15379 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HDAC3O15379 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.19■□□□□ 0.66
HDAC3O15379 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HDAC3O15379 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HDAC3O15379 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HDAC3O15379 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC3O15379 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC3O15379 AL138781.2-201ENST00000617896 1843 ntBASIC19.18■□□□□ 0.66
HDAC3O15379 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms