Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN1O15353 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC23.65■■□□□ 1.38
FOXN1O15353 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
FOXN1O15353 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.65■■□□□ 1.38
FOXN1O15353 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.65■■□□□ 1.38
FOXN1O15353 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN1O15353 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN1O15353 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN1O15353 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN1O15353 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN1O15353 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN1O15353 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
FOXN1O15353 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.64■■□□□ 1.38
FOXN1O15353 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
FOXN1O15353 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
FOXN1O15353 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
FOXN1O15353 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.64■■□□□ 1.38
FOXN1O15353 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
FOXN1O15353 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
FOXN1O15353 NBPF21P-201ENST00000425093 1451 ntBASIC23.64■■□□□ 1.38
FOXN1O15353 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
FOXN1O15353 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
FOXN1O15353 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.64■■□□□ 1.37
FOXN1O15353 FDX1P1-201ENST00000449115 551 ntBASIC23.64■■□□□ 1.37
FOXN1O15353 AP002982.1-201ENST00000492365 877 ntBASIC23.64■■□□□ 1.37
FOXN1O15353 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.64■■□□□ 1.37
FOXN1O15353 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
FOXN1O15353 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.64■■□□□ 1.37
FOXN1O15353 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
FOXN1O15353 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
FOXN1O15353 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
FOXN1O15353 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.63■■□□□ 1.37
FOXN1O15353 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC23.63■■□□□ 1.37
FOXN1O15353 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.63■■□□□ 1.37
FOXN1O15353 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.63■■□□□ 1.37
FOXN1O15353 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 AC073130.3-201ENST00000624389 2278 ntBASIC23.63■■□□□ 1.37
FOXN1O15353 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.63■■□□□ 1.37
FOXN1O15353 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
FOXN1O15353 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN1O15353 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
FOXN1O15353 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.62■■□□□ 1.37
FOXN1O15353 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN1O15353 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.62■■□□□ 1.37
FOXN1O15353 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN1O15353 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN1O15353 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN1O15353 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN1O15353 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.62■■□□□ 1.37
FOXN1O15353 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.62■■□□□ 1.37
FOXN1O15353 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN1O15353 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN1O15353 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.62■■□□□ 1.37
FOXN1O15353 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.62■■□□□ 1.37
FOXN1O15353 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
FOXN1O15353 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
FOXN1O15353 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.62■■□□□ 1.37
FOXN1O15353 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
FOXN1O15353 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.61■■□□□ 1.37
FOXN1O15353 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.61■■□□□ 1.37
FOXN1O15353 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.61■■□□□ 1.37
FOXN1O15353 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.61■■□□□ 1.37
FOXN1O15353 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.61■■□□□ 1.37
FOXN1O15353 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.61■■□□□ 1.37
FOXN1O15353 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.61■■□□□ 1.37
FOXN1O15353 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.61■■□□□ 1.37
FOXN1O15353 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
FOXN1O15353 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.61■■□□□ 1.37
FOXN1O15353 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN1O15353 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.6■■□□□ 1.37
FOXN1O15353 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN1O15353 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN1O15353 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.6■■□□□ 1.37
FOXN1O15353 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN1O15353 RNF152P1-201ENST00000397754 604 ntBASIC23.6■■□□□ 1.37
FOXN1O15353 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.6■■□□□ 1.37
FOXN1O15353 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.6■■□□□ 1.37
FOXN1O15353 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
FOXN1O15353 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN1O15353 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN1O15353 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms