Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1O15118 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.99■□□□□ 0.79
NPC1O15118 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
NPC1O15118 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1O15118 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1O15118 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.99■□□□□ 0.79
NPC1O15118 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1O15118 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1O15118 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
NPC1O15118 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1O15118 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NPC1O15118 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPC1O15118 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.98■□□□□ 0.79
NPC1O15118 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.98■□□□□ 0.79
NPC1O15118 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.98■□□□□ 0.79
NPC1O15118 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.98■□□□□ 0.79
NPC1O15118 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
NPC1O15118 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.98■□□□□ 0.79
NPC1O15118 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NPC1O15118 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 FSCN1P1-201ENST00000568912 1481 ntBASIC19.98■□□□□ 0.79
NPC1O15118 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPC1O15118 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NPC1O15118 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
NPC1O15118 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1O15118 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.97■□□□□ 0.79
NPC1O15118 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1O15118 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1O15118 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.97■□□□□ 0.79
NPC1O15118 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
NPC1O15118 AC145285.6-201ENST00000604632 637 ntBASIC19.97■□□□□ 0.79
NPC1O15118 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1O15118 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
NPC1O15118 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NPC1O15118 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1O15118 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.97■□□□□ 0.79
NPC1O15118 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1O15118 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1O15118 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPC1O15118 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.96■□□□□ 0.79
NPC1O15118 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.96■□□□□ 0.79
NPC1O15118 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NPC1O15118 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.96■□□□□ 0.79
NPC1O15118 FITM1-202ENST00000559294 800 ntBASIC19.96■□□□□ 0.79
NPC1O15118 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.96■□□□□ 0.79
NPC1O15118 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.96■□□□□ 0.79
NPC1O15118 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 AC079598.2-202ENST00000546624 1451 ntBASIC19.96■□□□□ 0.79
NPC1O15118 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPC1O15118 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.95■□□□□ 0.78
NPC1O15118 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1O15118 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NPC1O15118 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.95■□□□□ 0.78
NPC1O15118 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.95■□□□□ 0.78
NPC1O15118 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1O15118 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1O15118 MIR1224-201ENST00000408193 85 ntBASIC19.95■□□□□ 0.78
NPC1O15118 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.95■□□□□ 0.78
NPC1O15118 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1O15118 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.95■□□□□ 0.78
NPC1O15118 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.95■□□□□ 0.78
NPC1O15118 DGCR10-201ENST00000609839 495 ntBASIC19.95■□□□□ 0.78
NPC1O15118 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1O15118 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1O15118 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1O15118 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1O15118 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPC1O15118 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.95■□□□□ 0.78
NPC1O15118 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NPC1O15118 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1O15118 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1O15118 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1O15118 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1O15118 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1O15118 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1O15118 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.94■□□□□ 0.78
NPC1O15118 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NPC1O15118 KRT18P21-201ENST00000515767 1272 ntBASIC19.94■□□□□ 0.78
NPC1O15118 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPC1O15118 AP000525.1-201ENST00000608286 694 ntBASIC19.94■□□□□ 0.78
NPC1O15118 AC131212.4-201ENST00000623606 975 ntBASIC19.94■□□□□ 0.78
NPC1O15118 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms