Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYN3O14994 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYN3O14994 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYN3O14994 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.93■□□□□ 0.94
SYN3O14994 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYN3O14994 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYN3O14994 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SYN3O14994 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.93■□□□□ 0.94
SYN3O14994 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN3O14994 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SYN3O14994 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYN3O14994 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.92■□□□□ 0.94
SYN3O14994 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.92■□□□□ 0.94
SYN3O14994 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.92■□□□□ 0.94
SYN3O14994 FAM210CP-201ENST00000445714 574 ntBASIC20.92■□□□□ 0.94
SYN3O14994 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.92■□□□□ 0.94
SYN3O14994 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.92■□□□□ 0.94
SYN3O14994 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.92■□□□□ 0.94
SYN3O14994 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.92■□□□□ 0.94
SYN3O14994 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SYN3O14994 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SYN3O14994 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.92■□□□□ 0.94
SYN3O14994 AC079598.2-202ENST00000546624 1451 ntBASIC20.92■□□□□ 0.94
SYN3O14994 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYN3O14994 AP001271.2-201ENST00000624018 1556 ntBASIC20.92■□□□□ 0.94
SYN3O14994 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYN3O14994 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.92■□□□□ 0.94
SYN3O14994 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYN3O14994 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYN3O14994 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYN3O14994 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.91■□□□□ 0.94
SYN3O14994 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYN3O14994 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYN3O14994 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.91■□□□□ 0.94
SYN3O14994 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.91■□□□□ 0.94
SYN3O14994 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYN3O14994 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.91■□□□□ 0.94
SYN3O14994 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SYN3O14994 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.91■□□□□ 0.94
SYN3O14994 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYN3O14994 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.91■□□□□ 0.94
SYN3O14994 AP000525.1-201ENST00000608286 694 ntBASIC20.91■□□□□ 0.94
SYN3O14994 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.91■□□□□ 0.94
SYN3O14994 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.9■□□□□ 0.94
SYN3O14994 AC073314.1-201ENST00000568729 2216 ntBASIC20.9■□□□□ 0.94
SYN3O14994 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.9■□□□□ 0.94
SYN3O14994 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.9■□□□□ 0.94
SYN3O14994 TMEM179-206ENST00000616017 1645 ntBASIC20.9■□□□□ 0.94
SYN3O14994 FSCN1P1-201ENST00000568912 1481 ntBASIC20.9■□□□□ 0.94
SYN3O14994 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.9■□□□□ 0.94
SYN3O14994 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SYN3O14994 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 AP005212.1-201ENST00000581547 1997 ntBASIC20.9■□□□□ 0.94
SYN3O14994 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYN3O14994 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SYN3O14994 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYN3O14994 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.89■□□□□ 0.94
SYN3O14994 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYN3O14994 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYN3O14994 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYN3O14994 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.89■□□□□ 0.93
SYN3O14994 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.89■□□□□ 0.93
SYN3O14994 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.89■□□□□ 0.93
SYN3O14994 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SYN3O14994 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYN3O14994 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYN3O14994 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYN3O14994 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYN3O14994 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.88■□□□□ 0.93
SYN3O14994 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 AL137060.1-201ENST00000618151 2648 ntBASIC20.88■□□□□ 0.93
SYN3O14994 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SYN3O14994 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.88■□□□□ 0.93
SYN3O14994 AC004980.1-204ENST00000429707 299 ntBASIC20.88■□□□□ 0.93
SYN3O14994 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.88■□□□□ 0.93
SYN3O14994 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYN3O14994 FITM1-202ENST00000559294 800 ntBASIC20.88■□□□□ 0.93
SYN3O14994 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.88■□□□□ 0.93
SYN3O14994 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.88■□□□□ 0.93
SYN3O14994 AC131212.4-201ENST00000623606 975 ntBASIC20.88■□□□□ 0.93
SYN3O14994 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms