Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC32.29■■■□□ 2.76
CHD1O14646 SLC25A6P4-201ENST00000586535 553 ntBASIC32.29■■■□□ 2.76
CHD1O14646 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC32.29■■■□□ 2.76
CHD1O14646 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CHD1O14646 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC32.29■■■□□ 2.76
CHD1O14646 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC32.29■■■□□ 2.76
CHD1O14646 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
CHD1O14646 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CHD1O14646 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC32.28■■■□□ 2.76
CHD1O14646 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
CHD1O14646 H19-201ENST00000411754 1788 ntTSL 5 BASIC32.28■■■□□ 2.76
CHD1O14646 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CHD1O14646 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CHD1O14646 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC32.27■■■□□ 2.76
CHD1O14646 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC32.27■■■□□ 2.76
CHD1O14646 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CHD1O14646 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CHD1O14646 CA15P1-201ENST00000481698 905 ntBASIC32.27■■■□□ 2.76
CHD1O14646 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CHD1O14646 NT5C-210ENST00000582160 860 ntTSL 2 BASIC32.27■■■□□ 2.76
CHD1O14646 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
CHD1O14646 GOLGA6L3-201ENST00000507199 1679 ntBASIC32.27■■■□□ 2.76
CHD1O14646 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC32.27■■■□□ 2.76
CHD1O14646 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CHD1O14646 EMBP1-201ENST00000458200 901 ntBASIC32.26■■■□□ 2.76
CHD1O14646 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC32.26■■■□□ 2.76
CHD1O14646 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CHD1O14646 AC116351.2-201ENST00000606540 1585 ntBASIC32.26■■■□□ 2.75
CHD1O14646 TSPY12P-201ENST00000421279 868 ntBASIC32.26■■■□□ 2.75
CHD1O14646 AL732292.2-201ENST00000609649 430 ntBASIC32.26■■■□□ 2.75
CHD1O14646 PALM-207ENST00000590161 2137 ntTSL 4 BASIC32.25■■■□□ 2.75
CHD1O14646 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CHD1O14646 HBZP1-201ENST00000354915 429 ntBASIC32.25■■■□□ 2.75
CHD1O14646 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC32.25■■■□□ 2.75
CHD1O14646 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CHD1O14646 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC32.25■■■□□ 2.75
CHD1O14646 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC32.25■■■□□ 2.75
CHD1O14646 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CHD1O14646 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC32.25■■■□□ 2.75
CHD1O14646 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CHD1O14646 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
CHD1O14646 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CHD1O14646 Telomerase-vert.1-201ENST00000363312 438 ntBASIC32.24■■■□□ 2.75
CHD1O14646 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC32.24■■■□□ 2.75
CHD1O14646 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC32.24■■■□□ 2.75
CHD1O14646 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
CHD1O14646 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
CHD1O14646 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
CHD1O14646 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHD1O14646 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHD1O14646 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC32.23■■■□□ 2.75
CHD1O14646 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC32.23■■■□□ 2.75
CHD1O14646 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC32.23■■■□□ 2.75
CHD1O14646 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CHD1O14646 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
CHD1O14646 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHD1O14646 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC32.23■■■□□ 2.75
CHD1O14646 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHD1O14646 AP000523.1-201ENST00000398242 1049 ntBASIC32.23■■■□□ 2.75
CHD1O14646 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC32.23■■■□□ 2.75
CHD1O14646 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
CHD1O14646 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHD1O14646 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHD1O14646 TFP1-202ENST00000475455 1573 ntBASIC32.22■■■□□ 2.75
CHD1O14646 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
CHD1O14646 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC32.22■■■□□ 2.75
CHD1O14646 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CHD1O14646 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC32.22■■■□□ 2.75
CHD1O14646 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC32.22■■■□□ 2.75
CHD1O14646 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC32.22■■■□□ 2.75
CHD1O14646 AC104692.2-201ENST00000603054 253 ntBASIC32.22■■■□□ 2.75
CHD1O14646 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC32.21■■■□□ 2.75
CHD1O14646 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1O14646 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1O14646 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1O14646 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1O14646 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC32.21■■■□□ 2.75
CHD1O14646 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
CHD1O14646 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC32.21■■■□□ 2.75
CHD1O14646 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
CHD1O14646 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
CHD1O14646 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1O14646 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
CHD1O14646 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1O14646 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHD1O14646 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CHD1O14646 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CHD1O14646 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC32.2■■■□□ 2.75
CHD1O14646 NEK4P2-201ENST00000580004 1012 ntBASIC32.2■■■□□ 2.75
CHD1O14646 AC092329.2-201ENST00000598402 547 ntBASIC32.2■■■□□ 2.75
CHD1O14646 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CHD1O14646 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
CHD1O14646 ME2-206ENST00000638410 2289 ntTSL 5 BASIC32.2■■■□□ 2.75
CHD1O14646 ME2-210ENST00000639255 2262 ntTSL 5 BASIC32.2■■■□□ 2.75
CHD1O14646 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
CHD1O14646 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC32.2■■■□□ 2.75
CHD1O14646 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
CHD1O14646 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
CHD1O14646 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC32.2■■■□□ 2.74
CHD1O14646 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC32.2■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms