Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 AP000997.3-201ENST00000623333 2250 ntBASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CROCCP3-202ENST00000420820 1947 ntBASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TMEM256-PLSCR3K7ERE1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 OR6D1P-203ENST00000641209 4860 ntBASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 DUX4L18-201ENST00000553347 1267 ntBASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM256-PLSCR3K7ERE1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms