Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 AC092667.1-201ENST00000434301 2586 ntBASIC18■□□□□ 0.47
NPIPA3F8WFD2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 AL135905.2-201ENST00000584934 1404 ntBASIC18■□□□□ 0.47
NPIPA3F8WFD2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 HLA-G-202ENST00000376815 851 ntBASIC18■□□□□ 0.47
NPIPA3F8WFD2 HLA-G-203ENST00000376818 1127 ntBASIC18■□□□□ 0.47
NPIPA3F8WFD2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA3F8WFD2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 AL049637.2-201ENST00000641778 930 ntBASIC18■□□□□ 0.47
NPIPA3F8WFD2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA3F8WFD2 LINC01521-201ENST00000504184 1943 ntBASIC18■□□□□ 0.47
NPIPA3F8WFD2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.99■□□□□ 0.47
NPIPA3F8WFD2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 AC138932.1-201ENST00000534164 6830 ntBASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 KRT17P2-201ENST00000300992 1314 ntBASIC17.98■□□□□ 0.47
NPIPA3F8WFD2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms