Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 BX088651.1-201ENST00000540551 451 ntBASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 AP003071.4-201ENST00000562276 1284 ntBASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.83■□□□□ 0.77
C1QTNF3-AMACRE9PGA6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.83■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 C1QL1P1-201ENST00000568105 661 ntBASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 REXO1L12P-201ENST00000622156 912 ntBASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 KRT18P16-201ENST00000510337 1294 ntBASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AL355075.4-201ENST00000554988 638 ntBASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.81■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 KRT16P1-201ENST00000399124 1418 ntBASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CR392000.1-201ENST00000624770 1228 ntBASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AC073314.1-201ENST00000568729 2216 ntBASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 NUDT16P1-203ENST00000513809 620 ntBASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C1QTNF3-AMACRE9PGA6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms