Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF223E7ERA6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF223E7ERA6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF223E7ERA6 INGX-201ENST00000359239 846 ntBASIC16.41■□□□□ 0.22
RNF223E7ERA6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 AC022616.7-201ENST00000525383 220 ntBASIC16.41■□□□□ 0.22
RNF223E7ERA6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 AL358472.4-201ENST00000633140 710 ntBASIC16.41■□□□□ 0.22
RNF223E7ERA6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF223E7ERA6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF223E7ERA6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF223E7ERA6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF223E7ERA6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 AC004980.1-204ENST00000429707 299 ntBASIC16.4■□□□□ 0.22
RNF223E7ERA6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 AL121603.2-201ENST00000557373 2117 ntBASIC16.4■□□□□ 0.22
RNF223E7ERA6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF223E7ERA6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RNF223E7ERA6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RNF223E7ERA6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RNF223E7ERA6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 AC091076.1-201ENST00000610741 619 ntBASIC16.39■□□□□ 0.21
RNF223E7ERA6 FAM87A-204ENST00000613235 858 ntBASIC16.39■□□□□ 0.21
RNF223E7ERA6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 FBXW4P1-201ENST00000426721 2239 ntBASIC16.39■□□□□ 0.21
RNF223E7ERA6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF223E7ERA6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF223E7ERA6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 PKD1P6-201ENST00000343738 4769 ntBASIC16.38■□□□□ 0.21
RNF223E7ERA6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF223E7ERA6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RNF223E7ERA6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms