Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 AL499627.2-201ENST00000606283 725 ntBASIC18.36■□□□□ 0.53
CCDC160A6NGH7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC160A6NGH7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 AC139713.2-201ENST00000641328 2723 ntBASIC18.35■□□□□ 0.53
CCDC160A6NGH7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC160A6NGH7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 AC011484.1-201ENST00000377652 1995 ntBASIC18.34■□□□□ 0.53
CCDC160A6NGH7 KRT18P24-201ENST00000344739 1156 ntBASIC18.34■□□□□ 0.53
CCDC160A6NGH7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC160A6NGH7 AL691432.2-201ENST00000607222 2038 ntBASIC18.33■□□□□ 0.53
CCDC160A6NGH7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC160A6NGH7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC160A6NGH7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC160A6NGH7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC160A6NGH7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC160A6NGH7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CCDC160A6NGH7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CCDC160A6NGH7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC160A6NGH7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 AC087239.1-201ENST00000622671 572 ntBASIC18.33■□□□□ 0.52
CCDC160A6NGH7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC160A6NGH7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC160A6NGH7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC160A6NGH7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC160A6NGH7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC160A6NGH7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC160A6NGH7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC160A6NGH7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC160A6NGH7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC160A6NGH7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms