Protein–RNA interactions for Protein: A0A1W2PPD8

KDM4F, Lysine demethylase 4F, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4FA0A1W2PPD8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
KDM4FA0A1W2PPD8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
KDM4FA0A1W2PPD8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC29.27■■■□□ 2.28
KDM4FA0A1W2PPD8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC29.26■■■□□ 2.28
KDM4FA0A1W2PPD8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
KDM4FA0A1W2PPD8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 RASA4DP-201ENST00000460726 1199 ntBASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
KDM4FA0A1W2PPD8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 AC073648.2-201ENST00000510116 352 ntBASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
KDM4FA0A1W2PPD8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 NEK4P2-201ENST00000580004 1012 ntBASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 AL353801.3-201ENST00000609898 542 ntBASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
KDM4FA0A1W2PPD8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 AKR1C7P-201ENST00000305623 895 ntBASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
KDM4FA0A1W2PPD8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 AC010542.4-201ENST00000563151 1910 ntBASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 AP000867.3-201ENST00000524675 377 ntBASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 AC112497.1-201ENST00000624824 639 ntBASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC29.22■■■□□ 2.27
KDM4FA0A1W2PPD8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 CA15P1-201ENST00000481698 905 ntBASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC29.21■■■□□ 2.27
KDM4FA0A1W2PPD8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms