Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 AL031963.3-201ENST00000606441 850 ntBASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRBV27A0A0K0K1C4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 CYP21A1P-202ENST00000354927 1481 ntBASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 AC110285.6-201ENST00000617652 491 ntBASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRBV27A0A0K0K1C4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TRBV27A0A0K0K1C4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV27A0A0K0K1C4 KRT8P20-201ENST00000423953 1409 ntBASIC13.96□□□□□ -0.18
TRBV27A0A0K0K1C4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV27A0A0K0K1C4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV27A0A0K0K1C4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV27A0A0K0K1C4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV27A0A0K0K1C4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRBV27A0A0K0K1C4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 CROCCP3-202ENST00000420820 1947 ntBASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRBV27A0A0K0K1C4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRBV27A0A0K0K1C4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms