Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 RARRES2P4-201ENST00000514074 484 ntBASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 MFSD11-216ENST00000590393 1141 ntBASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-5A0A0J9YX44 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRBV5-5A0A0J9YX44 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRBV5-5A0A0J9YX44 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 CROCCP3-202ENST00000420820 1947 ntBASIC17.13■□□□□ 0.33
TRBV5-5A0A0J9YX44 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 MIR638-201ENST00000385237 100 ntBASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 KRT18P68-201ENST00000392293 1000 ntBASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-5A0A0J9YX44 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 NEFHP1-201ENST00000412845 2629 ntBASIC17.11■□□□□ 0.33
TRBV5-5A0A0J9YX44 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms