Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 AC093484.2-201ENST00000580996 2166 ntBASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 BX119927.1-201ENST00000636596 1552 ntBASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV23DV6A0A075B6W5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 UNC93B3-201ENST00000308076 687 ntBASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 AC008764.7-201ENST00000593779 1081 ntBASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
TRAV23DV6A0A075B6W5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 AC027682.1-201ENST00000562846 899 ntBASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TRAV23DV6A0A075B6W5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms