Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 IMMP1LP3-201ENST00000604197 224 ntBASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
SHANK2Q9UPX8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 AC117409.1-201ENST00000470499 1310 ntBASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 AC099677.3-201ENST00000427081 395 ntBASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 AC073909.1-201ENST00000447112 999 ntBASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 AC073850.1-201ENST00000449243 255 ntBASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 GAPDHP71-201ENST00000511530 1003 ntBASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.96□□□□□ -0.98
SHANK2Q9UPX8 AC005618.1-201ENST00000606901 3148 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 Z82209.2-201ENST00000623410 2012 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AOX3P-204ENST00000491025 2107 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AC127070.3-201ENST00000503695 3263 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AL031651.1-201ENST00000615357 1438 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 WDR95P-201ENST00000425638 1542 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 RPA2P2-201ENST00000419698 796 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 DUTP7-201ENST00000507982 486 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 ST13P12-201ENST00000508958 1094 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 TXNP4-201ENST00000575018 310 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AL137246.2-201ENST00000613439 662 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AC087269.2-201ENST00000641764 975 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 AC011504.1-201ENST00000623331 4103 ntBASIC8.95□□□□□ -0.98
SHANK2Q9UPX8 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 AL359976.1-201ENST00000418655 3528 ntBASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 AC006058.1-201ENST00000568686 5067 ntBASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 AC011225.1-201ENST00000457751 369 ntBASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 RN7SL329P-201ENST00000467740 299 ntBASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 SIAH1P1-201ENST00000479411 923 ntBASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 UBA52P7-201ENST00000486088 380 ntBASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 CYCSP22-201ENST00000517555 339 ntBASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 SAMMSON-227ENST00000642114 1199 ntBASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SHANK2Q9UPX8 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SHANK2Q9UPX8 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms