Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
RIMBP3Q9UFD9 AC114947.2-201ENST00000565748 2125 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 AC002090.1-201ENST00000625000 2138 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 SSX3-202ENST00000376893 800 ntTSL 2 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 SNORA51.8-201ENST00000384234 132 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 AL049693.1-201ENST00000402760 611 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 PRELID1P2-201ENST00000407805 396 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 RPL23AP18-201ENST00000416139 468 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 TDGF1P1-201ENST00000445734 527 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 AC083795.1-201ENST00000491760 320 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 SCARNA6.1-201ENST00000516989 238 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 IGLV3-6-201ENST00000523937 250 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 TXNP4-201ENST00000575018 310 ntBASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC9.35□□□□□ -0.91
RIMBP3Q9UFD9 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 RMRPP5-201ENST00000411156 267 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AC087672.1-201ENST00000479876 766 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AC026402.1-201ENST00000513642 170 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 PTTG3P-201ENST00000521862 606 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 DCN-209ENST00000546745 1026 ntTSL 3 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 CASC19-221ENST00000641309 1382 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 SALL4P7-201ENST00000555779 3120 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AC092821.3-202ENST00000641304 2767 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 GUCY1B2-204ENST00000531898 1979 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 OR10R3P-201ENST00000361688 942 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 RSL24D1P6-201ENST00000426934 401 ntBASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
RIMBP3Q9UFD9 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AC015871.4-201ENST00000624650 2260 ntBASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AL159987.1-201ENST00000347911 293 ntBASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 MIR199B-201ENST00000384849 110 ntBASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AC018809.2-201ENST00000602436 3823 ntBASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 LAPTM4BP2-201ENST00000604542 446 ntBASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AL139099.4-201ENST00000614802 114 ntBASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AC183089.2-201ENST00000637931 916 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms