Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 GOLT1A-201ENST00000308302 883 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 MIR367-201ENST00000362299 68 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 Y_RNA.33-201ENST00000362591 102 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 SNORD45.3-201ENST00000363836 72 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 RNU6-336P-201ENST00000364891 107 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 WFDC3-203ENST00000372630 597 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC026461.4-201ENST00000379816 242 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 MBD3L2-201ENST00000381393 793 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC138623.1-201ENST00000418060 216 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 KRTAP13-5P-201ENST00000418755 499 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PHBP11-201ENST00000420550 809 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AL357632.1-201ENST00000426688 643 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 CD79A-202ENST00000444740 567 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC106748.1-201ENST00000454801 384 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC02051-201ENST00000456535 690 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 RN7SL2-201ENST00000490232 300 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC010409.2-201ENST00000505780 478 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 RNU6-436P-201ENST00000516171 114 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 RNU6-904P-201ENST00000516206 101 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PKMP4-201ENST00000523134 306 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC027369.5-201ENST00000533838 755 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 TMEM208-210ENST00000565201 832 ntTSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 RN7SL802P-201ENST00000577858 299 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 MIR5588-201ENST00000581890 63 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 RN7SL4P-201ENST00000584058 295 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 FAM95B1-207ENST00000589112 768 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 SPCS2P2-201ENST00000603270 608 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AL589743.3-201ENST00000604121 517 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC008555.5-202ENST00000604749 570 ntTSL 4 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AP001993.2-201ENST00000609688 561 ntTSL 3 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 SNX20-205ENST00000610485 557 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 MST1R-213ENST00000612032 1065 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC024257.4-201ENST00000618746 458 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 CASP16P-204ENST00000635032 809 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC137936.2-201ENST00000636329 620 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 C16orf46-201ENST00000299578 1605 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 TRIM62-201ENST00000291416 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 SEC14L3-203ENST00000402286 1964 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 CASP3-201ENST00000308394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 CDKL2-202ENST00000429927 3383 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 BEND3P2-201ENST00000414425 2254 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 MOB4-202ENST00000323303 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 SPIN3-223ENST00000639525 3958 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 ZWILCH-202ENST00000446801 3256 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 TKTL1-201ENST00000369912 2566 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 ATP11AUN-201ENST00000623100 2241 ntTSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 ZNF691-204ENST00000372506 1859 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 OR2I1P-208ENST00000641137 4948 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC01138-209ENST00000639181 1534 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 STPG1-201ENST00000003583 2544 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 C17orf77-202ENST00000392620 2525 ntTSL 2 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC00488-201ENST00000494582 2520 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 ZPLD1-204ENST00000491959 2189 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 GDNF-201ENST00000326524 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 PRKG2-202ENST00000395578 3431 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 NFKB1-205ENST00000505458 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 ADAMTS7P3-201ENST00000566116 3716 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 DPP3P1-201ENST00000508984 2063 ntBASIC5.83□□□□□ -1.48
KRTAP3-3Q9BYR6 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-3Q9BYR6 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-3Q9BYR6 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-3Q9BYR6 SLC6A3-201ENST00000270349 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms