Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC003992.1-201ENST00000635364 557 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 PROS2P-201ENST00000474651 1951 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC114876.1-201ENST00000490962 1366 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 AC092701.1-201ENST00000623627 1551 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP1S3Q96PC3 MAPK10-328ENST00000641553 4009 ntBASIC4.61□□□□□ -1.67
AP1S3Q96PC3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 SNORD16-201ENST00000362803 99 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 RN7SKP151-201ENST00000410230 316 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 RN7SKP129-201ENST00000410288 299 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 RN7SKP30-201ENST00000411373 334 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 RANP6-201ENST00000413691 644 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC015977.1-201ENST00000418887 292 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 RBMY2JP-201ENST00000425544 1059 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC009362.1-201ENST00000427253 406 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 RPSAP65-201ENST00000429660 595 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 BX276092.6-201ENST00000430476 250 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC114402.2-201ENST00000432760 643 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AL161722.1-201ENST00000446972 1032 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 BX276092.8-201ENST00000455722 250 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 RN7SL456P-201ENST00000469290 295 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 RPL5P3-201ENST00000493817 889 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 RN7SKP242-201ENST00000515967 289 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 NPM1P42-201ENST00000560329 862 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC090616.1-201ENST00000583895 447 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC019257.2-201ENST00000605539 497 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AL008723.3-201ENST00000608926 449 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 KDM5DP1-201ENST00000622542 298 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 AC144833.1-201ENST00000567953 4089 ntBASIC4.6□□□□□ -1.67
AP1S3Q96PC3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP1S3Q96PC3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 SNORD1C-201ENST00000363315 78 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 RN7SKP130-201ENST00000364924 301 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 RPL12P10-201ENST00000413498 498 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 TUBBP10-201ENST00000427668 1301 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 CR391992.1-201ENST00000438601 394 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms