Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 FAM60CP-201ENST00000591086 664 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 BNIP3P32-201ENST00000600015 554 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 AC027243.2-201ENST00000602530 724 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 AC093783.1-201ENST00000612976 329 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 AL445649.1-201ENST00000615941 691 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 TCL6_3.1-201ENST00000619064 137 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 AC027559.1-201ENST00000636288 271 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 AC099654.3-201ENST00000447087 1546 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 BIN2P1-201ENST00000504996 1530 ntBASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.55□□□□□ -1.2
CHAMP1Q96JM3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 DDX6P1-205ENST00000441966 1436 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AKAP17BP-201ENST00000431706 2719 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 SNORD51.1-201ENST00000365405 77 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 ETF1P1-206ENST00000427296 984 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC009518.3-201ENST00000438972 253 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 ELOCP13-201ENST00000443934 329 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 SUMO2P1-206ENST00000445436 284 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC063955.1-201ENST00000462872 685 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 NAMPTP2-201ENST00000505629 1115 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 IGKV2D-38-201ENST00000518423 240 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 PDCL3P1-201ENST00000534575 734 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC090115.2-201ENST00000548060 883 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC091932.1-201ENST00000569381 427 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC068620.3-201ENST00000602749 560 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC098935.2-201ENST00000604222 466 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 SNORD96A-201ENST00000606577 79 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AL121782.1-201ENST00000611242 413 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC005858.3-201ENST00000624756 589 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 MTND2P41-201ENST00000637599 773 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 AC010401.2-201ENST00000575137 4934 ntBASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CHAMP1Q96JM3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.53□□□□□ -1.2
CHAMP1Q96JM3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CHAMP1Q96JM3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CHAMP1Q96JM3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CHAMP1Q96JM3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CHAMP1Q96JM3 AC090181.3-201ENST00000624777 1514 ntBASIC7.53□□□□□ -1.2
CHAMP1Q96JM3 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.53□□□□□ -1.2
CHAMP1Q96JM3 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CHAMP1Q96JM3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CHAMP1Q96JM3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms