Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CASC19-243ENST00000641588 1546 ntBASIC9.35□□□□□ -0.91
VPS8Q8N3P4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 OR7E101P-201ENST00000400428 513 ntBASIC9.35□□□□□ -0.91
VPS8Q8N3P4 AL451046.1-201ENST00000406097 534 ntBASIC9.35□□□□□ -0.91
VPS8Q8N3P4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 CDY17P-201ENST00000414121 1282 ntBASIC9.35□□□□□ -0.91
VPS8Q8N3P4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 OR2A1-AS1-202ENST00000467944 422 ntBASIC9.35□□□□□ -0.91
VPS8Q8N3P4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 AL137246.2-201ENST00000613439 662 ntBASIC9.35□□□□□ -0.91
VPS8Q8N3P4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 AC130304.1-201ENST00000622942 2385 ntBASIC9.35□□□□□ -0.91
VPS8Q8N3P4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
VPS8Q8N3P4 HSPD1P8-201ENST00000400121 1658 ntBASIC9.34□□□□□ -0.91
VPS8Q8N3P4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 RN7SKP128-201ENST00000364270 303 ntBASIC9.34□□□□□ -0.91
VPS8Q8N3P4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 AC004129.2-201ENST00000457229 287 ntBASIC9.34□□□□□ -0.91
VPS8Q8N3P4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 OR4A42P-201ENST00000531397 938 ntBASIC9.34□□□□□ -0.91
VPS8Q8N3P4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 AL589993.1-201ENST00000407450 2524 ntBASIC9.34□□□□□ -0.91
VPS8Q8N3P4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 THAP12P9-201ENST00000503971 2360 ntBASIC9.34□□□□□ -0.91
VPS8Q8N3P4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 AC027279.1-201ENST00000568885 4284 ntBASIC9.34□□□□□ -0.91
VPS8Q8N3P4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC9.34□□□□□ -0.91
VPS8Q8N3P4 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 FBXL21-201ENST00000297158 1305 ntBASIC9.33□□□□□ -0.92
VPS8Q8N3P4 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 AL360271.1-201ENST00000395679 510 ntBASIC9.33□□□□□ -0.92
VPS8Q8N3P4 AL035660.1-201ENST00000422041 222 ntBASIC9.33□□□□□ -0.92
VPS8Q8N3P4 RN7SL352P-201ENST00000466002 277 ntBASIC9.33□□□□□ -0.92
VPS8Q8N3P4 RPS23P6-201ENST00000466136 431 ntBASIC9.33□□□□□ -0.92
VPS8Q8N3P4 NENFP3-201ENST00000503735 313 ntBASIC9.33□□□□□ -0.92
VPS8Q8N3P4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 SNORD46.2-201ENST00000516021 102 ntBASIC9.33□□□□□ -0.92
VPS8Q8N3P4 IGLV3-30-201ENST00000524362 298 ntBASIC9.33□□□□□ -0.92
VPS8Q8N3P4 PCNAP4-201ENST00000532690 730 ntBASIC9.33□□□□□ -0.92
VPS8Q8N3P4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC9.33□□□□□ -0.92
VPS8Q8N3P4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 RPS17P17-201ENST00000419392 409 ntBASIC9.32□□□□□ -0.92
VPS8Q8N3P4 AL445687.2-201ENST00000458156 728 ntBASIC9.32□□□□□ -0.92
VPS8Q8N3P4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 MIR3614-201ENST00000581261 86 ntBASIC9.32□□□□□ -0.92
VPS8Q8N3P4 AC015802.2-201ENST00000589690 189 ntBASIC9.32□□□□□ -0.92
VPS8Q8N3P4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 AL512356.3-201ENST00000623005 461 ntBASIC9.32□□□□□ -0.92
VPS8Q8N3P4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 PDZK1P1-202ENST00000425209 1350 ntBASIC9.32□□□□□ -0.92
VPS8Q8N3P4 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 WBP11P1-201ENST00000562560 1931 ntBASIC9.32□□□□□ -0.92
VPS8Q8N3P4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
VPS8Q8N3P4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms