Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CCDC50Q8IVM0 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 KYNUP3-201ENST00000574386 1341 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC137056.2-201ENST00000624055 1958 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 RN7SKP151-201ENST00000410230 316 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 UBTFL2-201ENST00000411859 1191 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 GPN3P1-201ENST00000423883 535 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC016027.5-201ENST00000427227 210 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 COX4I1P2-201ENST00000447446 547 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AL034369.1-201ENST00000453808 477 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AL445687.2-201ENST00000458156 728 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC015524.1-201ENST00000491585 472 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 GM2AP2-201ENST00000491764 562 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC027334.1-201ENST00000603257 310 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC50Q8IVM0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC022164.1-201ENST00000568767 2673 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC003045.1-201ENST00000398779 713 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 RN7SKP129-201ENST00000410288 299 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 PSMD8P1-201ENST00000436275 769 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 EMC3-AS1-205ENST00000438698 534 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 MORF4-201ENST00000447135 971 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 RN7SL643P-201ENST00000471845 291 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC093719.1-201ENST00000480427 441 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 RN7SL284P-201ENST00000498823 275 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 SNORA70.11-201ENST00000515987 138 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 SNORA70.13-201ENST00000516116 138 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 CASP1P2-201ENST00000526830 1258 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AP001357.1-201ENST00000586304 1053 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 AC091059.2-201ENST00000623355 614 ntBASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC50Q8IVM0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 AL137141.1-201ENST00000624622 4836 ntBASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC50Q8IVM0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms