Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL591543.1-202ENST00000642095 4149 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 BRD9P1-201ENST00000529855 560 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC068831.8-201ENST00000620171 435 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 POLR1A-203ENST00000409681 6454 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS13CQ709C8 AC107980.1-201ENST00000558671 3355 ntBASIC4.75□□□□□ -1.65
VPS13CQ709C8 HPS5-203ENST00000396253 4725 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC011753.3-201ENST00000443436 406 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC139493.1-201ENST00000604368 397 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC008937.3-201ENST00000606813 1700 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 ACA64.4-201ENST00000459070 127 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 OR4A40P-201ENST00000533878 948 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC134349.2-201ENST00000535136 910 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC012616.1-201ENST00000600294 197 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC105046.1-201ENST00000566457 4997 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC131971.1-201ENST00000332881 1482 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 OR10R3P-201ENST00000361688 942 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 CEACAMP7-201ENST00000444105 496 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 AL022237.1-201ENST00000446663 358 ntBASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS13CQ709C8 AC009831.5-201ENST00000624000 3189 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC123769.1-201ENST00000530992 3192 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 PTCD2P2-201ENST00000415579 1095 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 RPL38P3-201ENST00000484463 213 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC063949.1-201ENST00000552900 865 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS13CQ709C8 AC109583.2-201ENST00000617367 129 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 MIR6758-201ENST00000620653 63 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS13CQ709C8 UGT2B27P-201ENST00000505092 1620 ntBASIC4.73□□□□□ -1.65
VPS13CQ709C8 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms