Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.42□□□□□ -1.22
CTR9Q6PD62 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CTR9Q6PD62 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CTR9Q6PD62 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 SNORA77.2-201ENST00000408571 112 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 RN7SKP144-201ENST00000411108 279 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 IGLV3-4-201ENST00000432300 244 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC069154.1-201ENST00000432914 542 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 RPL5P10-201ENST00000445207 894 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC097463.1-201ENST00000447288 481 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 Y_RNA.710-201ENST00000516975 110 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 KCTD9P4-201ENST00000526766 1166 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC090115.2-201ENST00000548060 883 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AC027229.1-201ENST00000583887 253 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 MIR1910-201ENST00000636955 80 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 AL354854.1-201ENST00000455940 1363 ntBASIC7.41□□□□□ -1.22
CTR9Q6PD62 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CTR9Q6PD62 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CTR9Q6PD62 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CTR9Q6PD62 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTR9Q6PD62 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTR9Q6PD62 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTR9Q6PD62 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CTR9Q6PD62 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTR9Q6PD62 RNA5SP433-201ENST00000364491 114 ntBASIC7.4□□□□□ -1.22
CTR9Q6PD62 SNORA70H-201ENST00000383910 135 ntBASIC7.4□□□□□ -1.22
CTR9Q6PD62 SNORA70J-201ENST00000384182 135 ntBASIC7.4□□□□□ -1.22
CTR9Q6PD62 SNORA51.9-201ENST00000384295 124 ntBASIC7.4□□□□□ -1.22
CTR9Q6PD62 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 RBBP4P1-201ENST00000502424 1276 ntBASIC7.4□□□□□ -1.22
CTR9Q6PD62 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 RNA5SP434-201ENST00000516647 121 ntBASIC7.4□□□□□ -1.22
CTR9Q6PD62 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CTR9Q6PD62 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTR9Q6PD62 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.4□□□□□ -1.22
CTR9Q6PD62 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTR9Q6PD62 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.4□□□□□ -1.23
CTR9Q6PD62 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CTR9Q6PD62 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.4□□□□□ -1.23
CTR9Q6PD62 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CTR9Q6PD62 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CTR9Q6PD62 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.4□□□□□ -1.23
CTR9Q6PD62 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CTR9Q6PD62 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.4□□□□□ -1.23
CTR9Q6PD62 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
CTR9Q6PD62 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CTR9Q6PD62 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.39□□□□□ -1.23
CTR9Q6PD62 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTR9Q6PD62 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTR9Q6PD62 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTR9Q6PD62 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTR9Q6PD62 HSPD1P9-201ENST00000420325 1636 ntBASIC7.39□□□□□ -1.23
CTR9Q6PD62 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTR9Q6PD62 SNORA21-201ENST00000362423 132 ntBASIC7.39□□□□□ -1.23
CTR9Q6PD62 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.39□□□□□ -1.23
CTR9Q6PD62 AC115283.1-201ENST00000427353 400 ntBASIC7.39□□□□□ -1.23
CTR9Q6PD62 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.39□□□□□ -1.23
CTR9Q6PD62 AL451136.1-201ENST00000435399 325 ntBASIC7.39□□□□□ -1.23
CTR9Q6PD62 GAPDHP23-201ENST00000444823 993 ntBASIC7.39□□□□□ -1.23
CTR9Q6PD62 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.39□□□□□ -1.23
CTR9Q6PD62 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms