Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.13□□□□□ -1.43
CDK3Q00526 AC067852.5-201ENST00000589299 310 ntBASIC6.13□□□□□ -1.43
CDK3Q00526 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.13□□□□□ -1.43
CDK3Q00526 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK3Q00526 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK3Q00526 AC073333.2-201ENST00000603589 769 ntBASIC6.13□□□□□ -1.43
CDK3Q00526 RN7SL261P-201ENST00000613441 282 ntBASIC6.13□□□□□ -1.43
CDK3Q00526 AC004801.6-201ENST00000616571 978 ntBASIC6.13□□□□□ -1.43
CDK3Q00526 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.13□□□□□ -1.43
CDK3Q00526 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.13□□□□□ -1.43
CDK3Q00526 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK3Q00526 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK3Q00526 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK3Q00526 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK3Q00526 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK3Q00526 AC093225.1-201ENST00000506867 1408 ntBASIC6.13□□□□□ -1.43
CDK3Q00526 AL391261.1-201ENST00000555712 1479 ntBASIC6.13□□□□□ -1.43
CDK3Q00526 CDY10P-201ENST00000452415 1567 ntBASIC6.13□□□□□ -1.43
CDK3Q00526 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK3Q00526 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDK3Q00526 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDK3Q00526 AC011416.1-201ENST00000514947 1732 ntBASIC6.13□□□□□ -1.43
CDK3Q00526 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.13□□□□□ -1.43
CDK3Q00526 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.13□□□□□ -1.43
CDK3Q00526 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK3Q00526 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 AC110373.1-201ENST00000505994 3505 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CDK3Q00526 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CDK3Q00526 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CDK3Q00526 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.12□□□□□ -1.43
CDK3Q00526 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CDK3Q00526 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK3Q00526 RNA5SP156-201ENST00000410250 110 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CDK3Q00526 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.12□□□□□ -1.43
CDK3Q00526 AL353662.1-201ENST00000439099 327 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 GAPDHP23-201ENST00000444823 993 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.12□□□□□ -1.43
CDK3Q00526 AL354854.1-201ENST00000455940 1363 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 AL158068.1-201ENST00000506116 616 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK3Q00526 CR383658.1-201ENST00000514609 734 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 RNA5SP434-201ENST00000516647 121 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 AC021269.1-201ENST00000526860 705 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK3Q00526 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK3Q00526 CYCSP38-201ENST00000559840 322 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 MIR3189-201ENST00000578735 73 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK3Q00526 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.12□□□□□ -1.43
CDK3Q00526 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
CDK3Q00526 AC107905.1-201ENST00000616204 426 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 MIR6778-201ENST00000617912 73 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 AC011815.2-201ENST00000618230 2021 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK3Q00526 AC022726.2-201ENST00000634673 547 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.12□□□□□ -1.43
CDK3Q00526 MIR1910-201ENST00000636955 80 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 OR7A1P-202ENST00000641542 1158 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
CDK3Q00526 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.12□□□□□ -1.43
CDK3Q00526 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDK3Q00526 BRAFP1-201ENST00000445336 2703 ntBASIC6.12□□□□□ -1.43
CDK3Q00526 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK3Q00526 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK3Q00526 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CDK3Q00526 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK3Q00526 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK3Q00526 AP001541.1-201ENST00000623322 1904 ntBASIC6.11□□□□□ -1.43
CDK3Q00526 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK3Q00526 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CDK3Q00526 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK3Q00526 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDK3Q00526 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK3Q00526 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK3Q00526 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK3Q00526 LYARP1-201ENST00000436977 1501 ntBASIC6.11□□□□□ -1.43
CDK3Q00526 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK3Q00526 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
CDK3Q00526 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK3Q00526 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK3Q00526 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CDK3Q00526 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms